Evidence map›Paper›PMID 25000307›Full record

ArticlePloS one2014

Hypoxia-inducible factor 2 alpha is essential for hepatic outgrowth and functions via the regulation of leg1 transcription in the zebrafish embryo.

Tzung-Yi Lin, Chi-Fu Chou, Hsin-Yu Chung, Chia-Yin Chiang, Chung-Hao Li, Jen-Leih Wu, Han-Jia Lin, Tun-Wen Pai, Chin-Hwa Hu, Wen-Shyong Tzou

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 42 citations in OpenAlex.

  1. Generation of In Vivo Traceable Hepatocyte-Like Cells from Human iPSCs.Methods in molecular biology (Clifton, N.J.) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Tzung-Yi LinInstitute of Bioscience and Biotechnology, National Taiwan Ocean University, Keelung, Taiwan.
Chi-Fu ChouInstitute of Bioscience and Biotechnology, National Taiwan Ocean University, Keelung, Taiwan.
Hsin-Yu ChungInstitute of Bioscience and Biotechnology, National Taiwan Ocean University, Keelung, Taiwan.
Chia-Yin ChiangInstitute of Bioscience and Biotechnology, National Taiwan Ocean University, Keelung, Taiwan.
Chung-Hao LiInstitute of Bioscience and Biotechnology, National Taiwan Ocean University, Keelung, Taiwan.
Jen-Leih WuInstitute of Cellular and Organismic Biology, Academia Sinica, Taipei, Taiwan.
Han-Jia LinInstitute of Bioscience and Biotechnology, National Taiwan Ocean University, Keelung, Taiwan.
Tun-Wen PaiDepartment of Computer Science and Engineering, National Taiwan Ocean University, Keelung, Taiwan.
Chin-Hwa HuInstitute of Bioscience and Biotechnology, National Taiwan Ocean University, Keelung, Taiwan.
Wen-Shyong TzouDepartment of Life Sciences, National Taiwan Ocean University, Keelung, Taiwan.
National Taiwan Ocean University · TWAcademia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The liver plays a vital role in metabolism, detoxification, digestion, and the maintenance of homeostasis. During development, the vertebrate embryonic liver undergoes a series of morphogenic processes known as hepatogenesis. Hepatogenesis can be separated into three interrelated processes: endoderm specification, hepatoblast differentiation, and hepatic outgrowth. Throughout this process, signaling molecules and transcription factors initiate and regulate the coordination of cell proliferation, apoptosis, differentiation, intercellular adhesion, and cell migration. Hifs are already recognized to be essential in embryonic development, but their role in hepatogenesis remains unknown. Using the zebrafish embryo as a model organism, we report that the lack of Hif2-alpha but not Hif1-alpha blocks hepatic outgrowth. While Hif2-alpha is not involved in hepatoblast specification, this transcription factor regulates hepatocyte cell proliferation during hepatic outgrowth. Furthermore, we demonstrated that the lack of Hif2-alpha can reduce the expression of liver-enriched gene 1 (leg1), which encodes a secretory protein essential for hepatic outgrowth. Additionally, exogenous mRNA expression of leg1 can rescue the small liver phenotype of hif2-alpha morphants. We also showed that Hif2-alpha directly binds to the promoter region of leg1 to control leg1 expression. Interestingly, we discovered overrepresented, high-density Hif-binding sites in the potential upstream regulatory sequences of leg1 in teleosts but not in terrestrial mammals. We concluded that hif2-alpha is a key factor required for hepatic outgrowth and regulates leg1 expression in zebrafish embryos. We also proposed that the hif2-alpha-leg1 axis in liver development may have resulted from the adaptation of teleosts to their environment.

Indexed as

Transcription, GeneticAnimalsBasic Helix-Loop-Helix ProteinsCell ProliferationCobaltEmbryo, NonmammalianEndothelial PAS Domain-Containing Protein 1Fibroblast Growth FactorsGene Expression Regulation, DevelopmentalGene Knockdown TechniquesHepatocyte Growth FactorIntestinesLiverOrgan SizePancreas, ExocrinePhenotypeBasic Helix-Loop-Helix ProteinsCobaltcobaltous chlorideEndothelial PAS Domain-Containing Protein 1Fibroblast Growth FactorsHepatocyte Growth Factorleg1.1 protein, zebrafishleg1.2 protein, zebrafishZebrafish Proteins

Identifiers

PMID25000307
PMCPMC4084947
OpenAlexW2009175965

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.