Evidence map›Paper›PMID 24999993›Full record

ArticlePloS one2014

TRIM68 negatively regulates IFN-β production by degrading TRK fused gene, a novel driver of IFN-β downstream of anti-viral detection systems.

Claire Wynne, Elisa Lazzari, Siobhán Smith, Eoghan M McCarthy, Joan Ní Gabhann, Lara E Kallal, Rowan Higgs, Angela Greco, Sally Ann Cryan, Christine A Biron and 1 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
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  3. Review
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  12. Review
  13. Intracellular Antiviral Immunity.Advances in virus research · 2018
    Review
  14. Review
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  16. Review
  17. Review
  18. Review
  19. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Claire WynneMolecular and Cellular Therapeutics, Royal College of Surgeons in Ireland, Dublin, Ireland; School of Biological Sciences, Dublin Institute of Technology, Dublin, Ireland.
Elisa LazzariMolecular and Cellular Therapeutics, Royal College of Surgeons in Ireland, Dublin, Ireland.
Siobhán SmithMolecular and Cellular Therapeutics, Royal College of Surgeons in Ireland, Dublin, Ireland.
Eoghan M McCarthyMolecular and Cellular Therapeutics, Royal College of Surgeons in Ireland, Dublin, Ireland.
Joan Ní GabhannMolecular and Cellular Therapeutics, Royal College of Surgeons in Ireland, Dublin, Ireland.
Lara E KallalDepartment of Molecular Microbiology and Immunology, Brown University, Providence, Rhode Island, United States of America.
Rowan HiggsMolecular and Cellular Therapeutics, Royal College of Surgeons in Ireland, Dublin, Ireland.
Angela Greco
Sally Ann CryanSchool of Pharmacy, Royal College of Surgeons in Ireland, Dublin, Ireland; Trinity Centre for Bioengineering, Trinity College Dublin, Dublin, Ireland.
Christine A BironDepartment of Molecular Microbiology and Immunology, Brown University, Providence, Rhode Island, United States of America.
Caroline A JefferiesMolecular and Cellular Therapeutics, Royal College of Surgeons in Ireland, Dublin, Ireland.
Royal College of Surgeons in Ireland · IEBrown University · US

Funding

Type 1 IFN Function and Signaling in Immunity to VirusesR01AI055677 · NIAID · BROWN UNIVERSITY · PI BIRON, CHRISTINE A. · 2003 to 2013
$3.5M
Type 1 IFN Function and Signaling in Immunity to VirusesR56AI055677 · NIAID · BROWN UNIVERSITY · PI BIRON, CHRISTINE A. · 2008 to 2009
$855k
NIAID NIH HHS AI055677NIAID NIH HHS R01 AI055677NIAID NIH HHS R56 AI055677
6 · The paper itself

Abstract

In recent years members of the tripartite motif-containing (TRIM) family of E3 ubiquitin ligases have been shown to both positively and negatively regulate viral defence and as such are emerging as compelling targets for modulating the anti-viral immune response. In this study we identify TRIM68, a close homologue of TRIM21, as a novel regulator of Toll-like receptor (TLR)- and RIG-I-like receptor (RLR)-driven type I IFN production. Proteomic analysis of TRIM68-containing complexes identified TRK-fused gene (TFG) as a potential TRIM68 target. Overexpression of TRIM68 and TFG confirmed their ability to associate, with TLR3 stimulation appearing to enhance the interaction. TFG is a known activator of NF-κB via its ability to interact with inhibitor of NF-κB kinase subunit gamma (IKK-γ) and TRAF family member-associated NF-κB activator (TANK). Our data identifies a novel role for TFG as a positive regulator of type I IFN production and suggests that TRIM68 targets TFG for lysosomal degradation, thus turning off TFG-mediated IFN-β production. Knockdown of TRIM68 in primary human monocytes resulted in enhanced levels of type I IFN and TFG following poly(I:C) treatment. Thus TRIM68 targets TFG, a novel regulator of IFN production, and in doing so turns off and limits type I IFN production in response to anti-viral detection systems.

Indexed as

Immunity, InnateAutoantigensDEAD Box Protein 58DEAD-box RNA HelicasesHEK293 CellsHeLa CellsHumansInterferon-betaPromoter Regions, GeneticProteinsProtein Structure, TertiaryProteolysisReceptors, ImmunologicTripartite Motif ProteinsUbiquitinationUbiquitin-Protein LigasesAutoantigensDEAD Box Protein 58DEAD-box RNA HelicasesInterferon-betaProteinsReceptors, ImmunologicRIGI protein, humanTFG protein, humanTRIM68 protein, humanTripartite Motif ProteinsUbiquitin-Protein LigasesVesicular Transport Proteins

Identifiers

PMID24999993
PMCPMC4084880
OpenAlexW2168350006

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.