Evidence map›Paper›PMID 24997765›Full record

ArticleNature neuroscience2014

Gene co-regulation by Fezf2 selects neurotransmitter identity and connectivity of corticospinal neurons.

Simona Lodato, Bradley J Molyneaux, Emanuela Zuccaro, Loyal A Goff, Hsu-Hsin Chen, Wen Yuan, Alyssa Meleski, Emi Takahashi, Shaun Mahony, John L Rinn and 2 more

Open access · greenAbstract read
In one paragraph

Article in Nature neuroscience, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 153 citations in OpenAlex.

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  17. Development of Differential Sublaminar Feedforward Inhibitory Circuits in CA1 Hippocampus RequiresThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  18. The Thymus as a Mirror of the Body's Gene Expression.Advances in experimental medicine and biology · 2025
    Review
  19. Article
  20. Article

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Simona LodatoDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, Massachusetts, USA.
Bradley J Molyneaux1] Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, Massachusetts, USA. [2] Department of Neurology, Massachusetts General Hospital, Boston, Massachusetts, USA.
Emanuela ZuccaroDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, Massachusetts, USA.
Loyal A Goff1] Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, Massachusetts, USA. [2] Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA. [3] Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Hsu-Hsin ChenDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, Massachusetts, USA.
Wen YuanDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, Massachusetts, USA.
Alyssa MeleskiDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, Massachusetts, USA.
Emi TakahashiDivision of Newborn Medicine, Department of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Shaun Mahony1] Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA. [2] Department of Biochemistry and Molecular Biology, Center for Eukaryotic Gene Regulation, The Pennsylvania State University, University Park, Pennsylvania, USA.ORCID 0000000226411807
John L Rinn1] Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, Massachusetts, USA. [2] Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA. [3] Department of Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, USA.
David K Gifford1] Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, Massachusetts, USA. [2] Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Paola ArlottaDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, Massachusetts, USA.
Harvard University · USBroad Institute · USBoston Children's Hospital · USMassachusetts Institute of Technology · US

Funding

Genetic targeting of cortical pyramidal neuron subtypesR01MH101268 · NIMH · COLD SPRING HARBOR LABORATORY · PI ARLOTTA, PAOLA, HUANG, Z JOSH · 2013 to 2017
$3.9M
Motor neuron selector genes and mechanism of their actionR01NS078097 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI WICHTERLE, HYNEK · 2012 to 2016
$2.7M
Projection neuron control over interneuron positioning into neocortical circuitryR01NS078164 · NINDS · HARVARD UNIVERSITY · PI ARLOTTA, PAOLA · 2013 to 2017
$1.8M
Fate specification of corticospinal neurons by cell autonomous signalingR01NS062849 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI ARLOTTA, PAOLA · 2009 to 2013
$1.8M
Development of Brain Connectivity in Human Fetus, Newborn, and Toddler AgesR01HD078561 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI TAKAHASHI (OKI), EMI · 2014 to 2018
$1.7M
Motor neuron selector genes and mechanism of their actionR56NS078097 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI WICHTERLE, HYNEK · 2017 to 2017
$593k
Development of Brain Connectivity in the Human FetusR21HD069001 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI TAKAHASHI (OKI), EMI · 2012 to 2013
$467k
NICHD NIH HHS HD069001NICHD NIH HHS HD078561NICHD NIH HHS R01 HD078561NICHD NIH HHS R21 HD069001NIMH NIH HHS MH101268NIMH NIH HHS R01 MH101268NINDS NIH HHS NS062849NINDS NIH HHS NS078164NINDS NIH HHS R01 NS062849NINDS NIH HHS R01 NS078097NINDS NIH HHS R01 NS078164NINDS NIH HHS R56 NS078097
6 · The paper itself

Abstract

The neocortex contains an unparalleled diversity of neuronal subtypes, each defined by distinct traits that are developmentally acquired under the control of subtype-specific and pan-neuronal genes. The regulatory logic that orchestrates the expression of these unique combinations of genes is unknown for any class of cortical neuron. Here, we report that Fezf2 is a selector gene able to regulate the expression of gene sets that collectively define mouse corticospinal motor neurons (CSMN). We find that Fezf2 directly induces the glutamatergic identity of CSMN via activation of Vglut1 (Slc17a7) and inhibits a GABAergic fate by repressing transcription of Gad1. In addition, we identify the axon guidance receptor EphB1 as a target of Fezf2 necessary to execute the ipsilateral extension of the corticospinal tract. Our data indicate that co-regulated expression of neuron subtype-specific and pan-neuronal gene batteries by a single transcription factor is one component of the regulatory logic responsible for the establishment of CSMN identity.

Indexed as

Gene Expression RegulationAnimalsDNA-Binding ProteinsGenes, SuppressorMiceMice, KnockoutMice, TransgenicMotor NeuronsNerve Tissue ProteinsNeurotransmitter AgentsPromoter Regions, GeneticPyramidal TractsSignal TransductionDNA-Binding ProteinsNerve Tissue ProteinsNeurotransmitter AgentsZfp312 protein, mouse

Identifiers

PMID24997765
PMCPMC4188416
OpenAlexW2046609126

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.