Evidence map›Paper›PMID 24995157›Full record

ArticleFrontiers in oncology2014

Human Leukocyte Antigen Class I and II Alleles and Cervical Adenocarcinoma.

Mahboobeh Safaeian, Lisa G Johnson, Kai Yu, Sophia S Wang, Patti E Gravitt, John A Hansen, Mary Carrington, Stephen M Schwartz, Xiaojiang Gao, Allan Hildesheim and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
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  11. The HLA-DRB1 allele polymorphisms and nasopharyngeal carcinoma.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 1 country.

Mahboobeh SafaeianDivision of Cancer Epidemiology and Genetics, National Cancer Institute , Bethesda, MD , USA.
Lisa G JohnsonPublic Health Sciences Division, Fred Hutchinson Cancer Research Center , Seattle, WA , USA.
Kai YuDivision of Cancer Epidemiology and Genetics, National Cancer Institute , Bethesda, MD , USA.
Sophia S WangDivision of Cancer Etiology, Department of Population Sciences, Beckman Research Institute and the City of Hope , Duarte, CA , USA.
Patti E GravittSchool of Medicine, The University of New Mexico , Albuquerque, NM , USA.
John A HansenPublic Health Sciences Division, Fred Hutchinson Cancer Research Center , Seattle, WA , USA.
Mary CarringtonCancer and Inflammation Program, Laboratory of Experimental Immunology, Leidos Biomedical Research, Inc., Frederick National Laboratory for Cancer Research , Frederick, MD , USA.
Stephen M SchwartzPublic Health Sciences Division, Fred Hutchinson Cancer Research Center , Seattle, WA , USA ; Department of Epidemiology, University of Washington , Seattle, WA , USA.
Xiaojiang GaoCancer and Inflammation Program, Laboratory of Experimental Immunology, Leidos Biomedical Research, Inc., Frederick National Laboratory for Cancer Research , Frederick, MD , USA.
Allan HildesheimDivision of Cancer Epidemiology and Genetics, National Cancer Institute , Bethesda, MD , USA.
Margaret M MadeleinePublic Health Sciences Division, Fred Hutchinson Cancer Research Center , Seattle, WA , USA ; Department of Epidemiology, University of Washington , Seattle, WA , USA.
Division of Cancer Epidemiology and GeneticsFred Hutch Cancer Center · USLeidos (United States) · USBeckman Research InstituteUniversity of New Mexico · USUniversity of Washington · US

Funding

VIROLOGIC/GENETIC FACTORS OF HPV NEOPLASMSP01CA042792 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MADELEINE, MARGARET M · 1987 to 2011
$21.0M
Effects of genetic polymorphism in MHC, KIR, and related loci on human diseaseZIABC010791 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI CARRINGTON, MARY N. · 2009 to 2025
$18.2M
Immune responses to HPV infection and HPV vaccinationZIACP010216 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI HILDESHEIM, ALLAN · 2010 to 2020
$6.5M
Immunogenetics of Cervical and Vulvar CancerR01CA112512 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI SCHWARTZ, STEPHEN M · 2005 to 2009
$3.2M
CCR NIH HHS HHSN261200800001CNCI NIH HHS HHSN261200800001ENCI NIH HHS P01 CA042792NCI NIH HHS R01 CA112512
6 · The paper itself

Abstract

backgroundAssociations between human leukocyte antigens (HLA) alleles and cervical cancer are largely representative of squamous cell carcinoma (SCC), the major histologic subtype. We evaluated the association between HLA class I (A, B, and C) and class II (DRB1 and DQB1) loci and risk of cervical adenocarcinoma (ADC), a less common but aggressive histologic subtype.

methodsWe pooled data from the Eastern and Western US Cervical Cancer studies, and evaluated the association between individual alleles and allele combinations and ADC (n = 630 ADC; n = 775 controls). Risk estimates were calculated for 11 a priori (based on known associations with cervical cancer regardless of histologic type) and 38 non a priori common alleles, as odds ratios (OR) and 95% confidence intervals (CI), adjusted for age and study. In exploratory analysis, we compared the risk associations between subgroups with HPV16 or HPV18 DNA in ADC tumor tissues in the Western US study cases and controls.

resultsThree of the a priori alleles were significantly associated with decreased risk of ADC [DRB1*13:01 (OR = 0.61; 95% CI: 0.41-0.93), DRB1*13:02 (OR = 0.49; 95% CI: 0.31-0.77), and DQB1*06:03 (OR = 0.64; 95% CI: 0.42-0.95)]; one was associated with increased risk [B*07:02 (OR = 1.39; 95% CI: 1.07-1.79)]. Among alleles not previously reported, DQB1*06:04 (OR = 0.46; 95% CI: 0.27-0.78) was associated with decreased risk of ADC and remained significant after correction for multiple comparisons, and C*07:02 (OR = 1.41; 95% CI: 1.09-1.81) was associated with increased risk. We did not observe a difference by histologic subtype. ADC was most strongly associated with increased risk with B*07:02/C*07:02 alleles (OR = 1.33; 95% CI: 1.01-1.76) and decreased risk with DRB1*13:02/DQB1*06:04 (OR = 0.41; 95% CI: 0.21-0.80).

conclusionRESULTS suggest that HLA allele associations with cervical ADC are similar to those for cervical SCC. An intriguing finding was the difference in risk associated with several alleles restricted to HPV16 or HPV18-related tumors, consistent with the hypothesis that HLA recognition is HPV type-specific.

Indexed as

cervical adenocarcinomaHLA class IHLA class IIhost geneticsHPV

Identifiers

PMID24995157
PMCPMC4062965
OpenAlexW2015011588

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.