Evidence map›Paper›PMID 24992693›Full record

ArticlePloS one2014

The roles of individual mammalian argonautes in RNA interference in vivo.

Vera M Ruda, Rohit Chandwani, Alfica Sehgal, Roman L Bogorad, Akin Akinc, Klaus Charisse, Alexander Tarakhovsky, Tatiana I Novobrantseva, Victor Koteliansky

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 23 citations in OpenAlex.

  1. Dual-functional nanoplatform for simultaneous degradation of circRNAJournal of Zhejiang University. Science. B · 2026
    Article
  2. Emerging RNAi Therapies to Treat Hypertension.Molecular diagnosis & therapy · 2025
    Review
  3. Navigating Lipodystrophy: Insights from Laminopathies and Beyond.International journal of molecular sciences · 2024
    Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Molecular Characterization and the Function ofInternational journal of molecular sciences · 2018
    Article
  14. Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Vera M RudaKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Rohit ChandwaniLaboratory of Immune Cell Epigenetics and Signaling, Rockefeller University, New York, New York, United States of America.
Alfica SehgalAlnylam Pharmaceuticals, Cambridge, Massachusetts, United States of America.
Roman L BogoradKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Akin AkincAlnylam Pharmaceuticals, Cambridge, Massachusetts, United States of America.
Klaus CharisseAlnylam Pharmaceuticals, Cambridge, Massachusetts, United States of America.
Alexander TarakhovskyLaboratory of Immune Cell Epigenetics and Signaling, Rockefeller University, New York, New York, United States of America.
Tatiana I NovobrantsevaAlnylam Pharmaceuticals, Cambridge, Massachusetts, United States of America.
Victor KotelianskyKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Alnylam Pharmaceuticals (United States) · USMassachusetts Institute of Technology · USRockefeller University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Argonaute 2 (Ago2) is the only mammalian Ago protein capable of mRNA cleavage. It has been reported that the activity of the short interfering RNA targeting coding sequence (CDS), but not 3' untranslated region (3'UTR) of an mRNA, is solely dependent on Ago2 in vitro. These studies utilized extremely high doses of siRNAs and overexpressed Ago proteins, as well as were directed at various highly expressed reporter transgenes. Here we report the effect of Ago2 in vivo on targeted knockdown of several endogenous genes by siRNAs, targeting both CDS and 3'UTR. We show that siRNAs targeting CDS lose their activity in the absence of Ago2, whereas both Ago1 and Ago3 proteins contribute to residual 3'UTR-targeted siRNA-mediated knockdown observed in the absence of Ago2 in mouse liver. Our results provide mechanistic insight into two components mediating RNAi under physiological conditions: mRNA cleavage dependent and independent. In addition our results contribute a novel consideration for designing most efficacious siRNA molecules with the preference given to 3'UTR targeting as to harness the activity of several Ago proteins.

Indexed as

AnimalsArgonaute ProteinsCells, CulturedEmbryo, MammalianEukaryotic Initiation FactorsFemaleFibroblastsLiverMiceMice, Inbred C57BLMice, TransgenicNIH 3T3 CellsRNA InterferenceRNA, MessengerAgo1 protein, mouseAgo2 protein, mouseAgo3 protein, mouseArgonaute ProteinsEukaryotic Initiation FactorsRNA, Messenger

Identifiers

PMID24992693
PMCPMC4081796
OpenAlexW2064706592

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.