Evidence map›Paper›PMID 24992574›Full record

ArticleJournal of neuroscience methods2014

Validation of video motion-detection scoring of forced swim test in mice.

Vance Gao, Martha Hotz Vitaterna, Fred W Turek

Open access · greenAbstract readValidation Study
In one paragraph

Article in Journal of neuroscience methods, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Vance GaoCenter for Sleep and Circadian Biology, Department of Neurobiology, Northwestern University, 2205 Tech Drive, Hogan Hall 2-160, Evanston, IL 60208, United States. Electronic address: v-gao@u.northwestern.edu.
Martha Hotz VitaternaCenter for Sleep and Circadian Biology, Department of Neurobiology, Northwestern University, 2205 Tech Drive, Hogan Hall 2-160, Evanston, IL 60208, United States. Electronic address: m-vitaterna@northwestern.edu.
Fred W TurekCenter for Sleep and Circadian Biology, Department of Neurobiology, Northwestern University, 2205 Tech Drive, Hogan Hall 2-160, Evanston, IL 60208, United States. Electronic address: fturek@northwestern.edu.
Northwestern University · US

Funding

TRAINING GRANT IN SLEEP RESEARCHT32HL007909 · NHLBI · NORTHWESTERN UNIVERSITY · PI FRED W TUREK, Phyllis C. Zee · 1998 to 2026
$9.2M
NHLBI NIH HHS T32 HL007909
6 · The paper itself

Abstract

backgroundThe forced swim test (FST) is used to predict the effectiveness of novel antidepressant treatments. In this test, a mouse or rat is placed in a beaker of water for several minutes, and the amount of time spent passively floating is measured; antidepressants reduce the amount of such immobility. Though the FST is commonly used, manually scoring the test is time-consuming and involves considerable subjectivity. NEW

methodWe developed a simple MATLAB-based motion-detection method to quantify mice's activity in videos of FST. FST trials are video-recorded from a side view. Each pixel of the video is compared between subsequent video frames; if the pixel's color difference surpasses a threshold, a motion count is recorded.

resultsHuman-scored immobility time correlates well with total motion detected by the computer (r=-0.80) and immobility time determined by the computer (r=0.83). Our computer method successfully detects group differences in activity between genotypes and different days of testing. Furthermore, we observe heterosis for this behavior, in which (C57BL/6J×A/J) F1 hybrid mice are more active in the FST than the parental strains. COMPARISON WITH EXISTING

methodsThis computer-scoring method is much faster and more objective than human scoring. Other automatic scoring methods exist, but they require the purchase of expensive hardware and/or software.

conclusionThis computer-scoring method is an effective, fast, and low-cost method of quantifying the FST. It is validated by replicating statistical differences observed in traditional visual scoring. We also demonstrate a case of heterosis in the FST.

Indexed as

MotionNeuropsychological TestsSwimmingAnimalsDepressionMiceMice, Inbred C57BLMotor ActivityPattern Recognition, AutomatedSoftwareSpecies SpecificityTime FactorsVideo RecordingAutomationDepressionForced swim testHeterosisOverdominanceStrain differencesVideo analysis

Identifiers

PMID24992574
PMCPMC4315190
OpenAlexW1979877045

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.