Evidence map›Paper›PMID 24991542›Full record

ArticleBioMed research international2014

Promoter region hypermethylation and mRNA expression of MGMT and p16 genes in tissue and blood samples of human premalignant oral lesions and oral squamous cell carcinoma.

Vikram Bhatia, Madhu Mati Goel, Annu Makker, Shikha Tewari, Alka Yadu, Priyanka Shilpi, Sandeep Kumar, S P Agarwal, Sudhir K Goel

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 3 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 3 syntheses or guidelines pooled it, 37 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
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  7. Expression Profiles ofBiomedicines · 2022
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  8. Review
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  12. Article
  13. Review
  14. Article
  15. Aberrant DNA methylation of theJournal of Cancer · 2018
    Article
  16. Review
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Vikram BhatiaDepartment of Pathology, King George's Medical University, Lucknow 226003, India.
Madhu Mati GoelDepartment of Pathology, King George's Medical University, Lucknow 226003, India.ORCID 0000-0001-7033-184X
Annu MakkerDepartment of Pathology, King George's Medical University, Lucknow 226003, India.
Shikha TewariPetroleum Toxicology Division, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Lucknow 226003, India.
Alka YaduDepartment of Biochemistry, Saraswati Dental College, Lucknow 227105, India.
Priyanka ShilpiDepartment of Pathology, King George's Medical University, Lucknow 226003, India.
Sandeep KumarAll India Institute of Medical Sciences, Bhopal, Madhya Pradesh 462026, India.
S P AgarwalDepartment of Otorhinolaryngology, King George's Medical University, Lucknow 226003, India.
Sudhir K GoelPetroleum Toxicology Division, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Lucknow 226003, India ; Department of Biochemistry, All India Institute of Medical Sciences, Bhopal, Madhya Pradesh 462026, India.
King George's Medical University · INAll India Institute of Medical Sciences Bhopal · INIndian Institute of Toxicology Research · INSaraswati Dental College and Hospital · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Promoter methylation and relative gene expression of O(6)-methyguanine-DNA-methyltransferase (MGMT) and p16 genes were examined in tissue and blood samples of patients with premalignant oral lesions (PMOLs) and oral squamous cell carcinoma (OSCC). Methylation-specific PCR and reverse transcriptase PCR were performed in 146 tissue and blood samples from controls and patients with PMOLs and OSCC. In PMOL group, significant promoter methylation of MGMT and p16 genes was observed in 59% (P = 0.0010) and 57% (P = 0.0016) of tissue samples, respectively, and 39% (P = 0.0135) and 33% (P = 0.0074) of blood samples, respectively. Promoter methylation of both genes was more frequent in patients with OSCC, that is, 76% (P = 0.0001) and 82% (P = 0.0001) in tissue and 57% (P = 0.0002) and 70% (P = 0.0001) in blood, respectively. Significant downregulation of MGMT and p16 mRNA expression was observed in both tissue and blood samples from patients with PMOLs and OSCC. Hypermethylation-induced transcriptional silencing of MGMT and p16 genes in both precancer and cancer suggests important role of these changes in progression of premalignant state to malignancy. Results support use of blood as potential surrogate to tissue samples for screening or diagnosing PMOLs and early OSCC.

Indexed as

AdultAgedCarcinoma, Squamous CellCyclin-Dependent Kinase Inhibitor p16DNA MethylationDNA Modification MethylasesDNA Repair EnzymesFemaleGene Expression Regulation, NeoplasticHumansMaleMiddle AgedMouth NeoplasmsPrecancerous ConditionsPromoter Regions, GeneticRNA, MessengerCyclin-Dependent Kinase Inhibitor p16DNA Modification MethylasesDNA Repair EnzymesMGMT protein, humanRNA, MessengerTumor Suppressor Proteins

Identifiers

PMID24991542
PMCPMC4058681
OpenAlexW2100920077

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.