Evidence map›Paper›PMID 24990941›Full record

ArticleThe Journal of biological chemistry2014

Direct evidence of an elongation factor-Tu/Ts·GTP·Aminoacyl-tRNA quaternary complex.

Benjamin J Burnett, Roger B Altman, Angelica Ferguson, Michael R Wasserman, Zhou Zhou, Scott C Blanchard

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Tuning tRNAs for improved translation.Frontiers in genetics · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Elongation factor-Tu can repetitively engage aminoacyl-tRNA within the ribosome during the proofreading stage of tRNA selection.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Activation of contact-dependent antibacterial tRNase toxins by translation elongation factors.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Benjamin J BurnettFrom the Department of Physiology and Biophysics and.
Roger B AltmanFrom the Department of Physiology and Biophysics and.
Angelica FergusonTri-Institutional Program in Chemical Biology, Weill Cornell Medical College, New York, New York 10065.
Michael R WassermanFrom the Department of Physiology and Biophysics and.
Zhou ZhouFrom the Department of Physiology and Biophysics and.
Scott C BlanchardFrom the Department of Physiology and Biophysics and Tri-Institutional Program in Chemical Biology, Weill Cornell Medical College, New York, New York 10065 scb2005@med.cornell.edu.
Cornell University · USTri-Institutional PhD Program in Chemical Biology · US

Funding

Imaging Protein Synthesis on the Ribosome using Single-Molecule FRETR01GM079238 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI BLANCHARD, SCOTT C · 2006 to 2023
$7.0M
Next-generation Fluorescent Probes for Biological ResearchR01GM098859 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI BLANCHARD, SCOTT C · 2012 to 2019
$2.9M
Quantitative investigations of transporter dynamics and uptake at the single-moleR21MH099491 · NIMH · WEILL MEDICAL COLL OF CORNELL UNIV · PI BLANCHARD, SCOTT C · 2013 to 2014
$415k
smFRET Investigation of Aminoglycoside-induced OtotoxicityF31DC012026 · NIDCD · WEILL MEDICAL COLL OF CORNELL UNIV · PI WASSERMAN, MICHAEL R · 2011 to 2013
$126k
NIDCD NIH HHS F31 DC012026NIGMS NIH HHS GM079238NIGMS NIH HHS GM098859NIGMS NIH HHS R01 GM079238NIGMS NIH HHS R01 GM098859NIMH NIH HHS MH099491NIMH NIH HHS R21 MH099491
6 · The paper itself

Abstract

During protein synthesis, elongation factor-Tu (EF-Tu) bound to GTP chaperones the entry of aminoacyl-tRNA (aa-tRNA) into actively translating ribosomes. In so doing, EF-Tu increases the rate and fidelity of the translation mechanism. Recent evidence suggests that EF-Ts, the guanosine nucleotide exchange factor for EF-Tu, directly accelerates both the formation and dissociation of the EF-Tu-GTP-Phe-tRNA(Phe) ternary complex (Burnett, B. J., Altman, R. B., Ferrao, R., Alejo, J. L., Kaur, N., Kanji, J., and Blanchard, S. C. (2013) J. Biol. Chem. 288, 13917-13928). A central feature of this model is the existence of a quaternary complex of EF-Tu/Ts·GTP·aa-tRNA(aa). Here, through comparative investigations of phenylalanyl, methionyl, and arginyl ternary complexes, and the development of a strategy to monitor their formation and decay using fluorescence resonance energy transfer, we reveal the generality of this newly described EF-Ts function and the first direct evidence of the transient quaternary complex species. These findings suggest that EF-Ts may regulate ternary complex abundance in the cell through mechanisms that are distinct from its guanosine nucleotide exchange factor functions.

Indexed as

Escherichia coliEscherichia coli ProteinsGuanosine TriphosphateModels, MolecularPeptide Elongation FactorsPeptide Elongation Factor TuRibosomesRNA, Transfer, Amino Acylelongation factor TsEscherichia coli ProteinsGuanosine TriphosphatePeptide Elongation FactorsPeptide Elongation Factor TuRNA, Transfer, Amino AcylElongation Factor TsElongation Factor TuG ProteinGuanine Nucleotide Exchange Factor (GEF)Guanosine Nucleotide Exchange FactorProtein SynthesisTernary ComplexTranslationTranslation Elongation Factor

Identifiers

PMID24990941
PMCPMC4156062
OpenAlexW2360859268

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.