Evidence map›Paper›PMID 24990676›Full record

ArticleProceedings. Biological sciences2014

Frequent, independent transfers of a catabolic gene from bacteria to contrasted filamentous eukaryotes.

Maxime Bruto, Claire Prigent-Combaret, Patricia Luis, Yvan Moënne-Loccoz, Daniel Muller

Abstract read
In one paragraph

Article in Proceedings. Biological sciences, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 41 citations in OpenAlex.

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  11. Biochemical Characterization of theFrontiers in plant science · 2019
    Article
  12. Article
  13. Review
  14. Sampling the mobile gene pool: innovation via horizontal gene transfer in bacteria.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  15. Article
  16. Article
  17. Genomics and the making of yeast biodiversity.Current opinion in genetics & development · 2015
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Maxime BrutoUniversité de Lyon, Lyon 69622, France Université Lyon 1, Villeurbanne, France CNRS, UMR5557, Ecologie Microbienne, Villeurbanne, France.
Claire Prigent-CombaretUniversité de Lyon, Lyon 69622, France Université Lyon 1, Villeurbanne, France CNRS, UMR5557, Ecologie Microbienne, Villeurbanne, France.
Patricia LuisUniversité de Lyon, Lyon 69622, France Université Lyon 1, Villeurbanne, France CNRS, UMR5557, Ecologie Microbienne, Villeurbanne, France.
Yvan Moënne-LoccozUniversité de Lyon, Lyon 69622, France Université Lyon 1, Villeurbanne, France CNRS, UMR5557, Ecologie Microbienne, Villeurbanne, France.
Daniel MullerUniversité de Lyon, Lyon 69622, France Université Lyon 1, Villeurbanne, France CNRS, UMR5557, Ecologie Microbienne, Villeurbanne, France daniel.muller@univ-lyon1.fr.
Ecologie Microbienne Lyon · FRUniversité Claude Bernard Lyon 1 · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Even genetically distant prokaryotes can exchange genes between them, and these horizontal gene transfer events play a central role in adaptation and evolution. While this was long thought to be restricted to prokaryotes, certain eukaryotes have acquired genes of bacterial origin. However, gene acquisitions in eukaryotes are thought to be much less important in magnitude than in prokaryotes. Here, we describe the complex evolutionary history of a bacterial catabolic gene that has been transferred repeatedly from different bacterial phyla to stramenopiles and fungi. Indeed, phylogenomic analysis pointed to multiple acquisitions of the gene in these filamentous eukaryotes-as many as 15 different events for 65 microeukaryotes. Furthermore, once transferred, this gene acquired introns and was found expressed in mRNA databases for most recipients. Our results show that effective inter-domain transfers and subsequent adaptation of a prokaryotic gene in eukaryotic cells can happen at an unprecedented magnitude.

Indexed as

Evolution, MolecularGenes, BacterialGene Transfer, HorizontalBiological EvolutionCarbon-Carbon LyasesEukaryotaFungiIntronsPhylogenyPseudomonas fluorescensSelection, GeneticStramenopiles1-aminocyclopropane-1-carboxylate deaminaseCarbon-Carbon Lyasesadaptive horizontal transferinter-domain transferlateral gene transfer

Identifiers

PMID24990676
PMCPMC4100511
OpenAlexW1963959046

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.