Evidence map›Paper›PMID 24990082›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2014

Histone deacetylation critically determines T cell subset radiosensitivity.

Jason L Pugh, Alona S Sukhina, Thomas M Seed, Nancy R Manley, Gregory D Sempowski, Marcel R M van den Brink, Megan J Smithey, Janko Nikolich-Žugich

Open access · greenAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Normal Tissue Injury Induced by Photon and Proton Therapies: Gaps and Opportunities.International journal of radiation oncology, biology, physics · 2021
    Review
  8. Article
  9. Review
  10. Article
  11. Genome-Protecting Compounds as Potential Geroprotectors.International journal of molecular sciences · 2020
    Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. CD4International journal of hematology · 2017
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Jason L PughDepartment of Immunobiology, University of Arizona College of Medicine, Tucson, AZ 85724; Arizona Center on Aging, University of Arizona College of Medicine, Tucson, AZ 85724; Graduate Interdisciplinary Program in Genetics, University of Arizona, Tucson, AZ 85719;
Alona S SukhinaDepartment of Immunobiology, University of Arizona College of Medicine, Tucson, AZ 85724; Arizona Center on Aging, University of Arizona College of Medicine, Tucson, AZ 85724;
Thomas M SeedRadiation Effects Research Foundation, Hiroshima 732-0815, Japan;
Nancy R ManleyDepartment of Genetics, University of Georgia, Athens, GA 30602;
Gregory D SempowskiDepartment of Medicine, Duke University, Durham, NC 27710; Department of Pathology, Duke University, Durham, NC 27710; Duke Human Vaccine Institute, Duke University, Durham, NC 27710;
Marcel R M van den BrinkDepartment of Medicine, Memorial Sloan-Kettering Cancer Center, New York, NY 10021; Department of Immunology, Memorial Sloan-Kettering Cancer Center, New York, NY 10021; and.
Megan J SmitheyDepartment of Immunobiology, University of Arizona College of Medicine, Tucson, AZ 85724; Arizona Center on Aging, University of Arizona College of Medicine, Tucson, AZ 85724;
Janko Nikolich-ŽugichDepartment of Immunobiology, University of Arizona College of Medicine, Tucson, AZ 85724; Arizona Center on Aging, University of Arizona College of Medicine, Tucson, AZ 85724; Graduate Interdisciplinary Program in Genetics, University of Arizona, Tucson, AZ 85719; BIO5 Institute, University of Arizona, Tucson, AZ 85719 nikolich@email.arizona.edu.
University of Arizona · USDuke University Hospital · USMemorial Sloan Kettering Cancer Center · USRadiation Effects Research Foundation · JPUniversity of Georgia · US

Funding

Regional Biocontainment Laboratory (RBL)UC6AI058607 · NIAID · DUKE UNIVERSITY · PI WILLIAMS, R SANDERS · 2003 to 2005
$16.3M
IMMUNE FUNCTION AND BIODEFENSE IN CHILDREN.ELDERLY AND IMMUNOCOMPROMIS-266050027N01AI050027 · NIAID · OREGON HEALTH SCIENCE UNIVER · PI NIKOLICH-ZUGICH, JANKO · 2006 to 2006
–
NIAID NIH HHS HHSN272200900059CNIAID NIH HHS N01 AI050027NIAID NIH HHS UC6 AI058607
6 · The paper itself

Abstract

Lymphocytes are sensitive to ionizing radiation and naive lymphocytes are more radiosensitive than their memory counterparts. Less is known about radiosensitivity of memory cell subsets. We examined the radiosensitivity of naive (TN), effector memory (TEM), and central memory (TCM) T cell subsets in C57BL/6 mice and found TEM to be more resistant to radiation-induced apoptosis than either TN or TCM. Surprisingly, we found no correlation between the extent of radiation-induced apoptosis in T cell subsets and 1) levels of pro- and antiapoptotic Bcl-2 family members or 2) the H2AX content and maximal γH2AX fold change. Rather, TEM cell survival correlated with higher levels of immediate γH2AX marking, immediate break binding and genome-wide open chromatin structure. T cells were able to mark DNA damage seemingly instantly (30 s), even if kept on ice. Relaxing chromatin with the histone deacetylase inhibitor valproic acid following radiation or etoposide treatment improved the survival of TCM and TN cells up to levels seen in the resistant TEM cells but did not improve survival from caspase-mediated apoptosis. We conclude that an open genome-wide chromatin state is the key determinant of efficient immediate repair of DNA damage in T cells, explaining the observed T cell subset radiosensitivity differences.

Indexed as

Histone Deacetylase InhibitorsAnimalsApoptosisCell SurvivalDNA Breaks, Double-StrandedDNA RepairDose-Response Relationship, ImmunologicDose-Response Relationship, RadiationMaleMiceMice, Inbred C57BLT-Lymphocyte SubsetsHistone Deacetylase Inhibitors

Identifiers

PMID24990082
PMCPMC4108568
OpenAlexW2101358405

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.