Evidence map›Paper›PMID 24988358›Full record

ArticleBiophysical journal2014

A G-protein subunit translocation embedded network motif underlies GPCR regulation of calcium oscillations.

Lopamudra Giri, Anilkumar K Patel, W K Ajith Karunarathne, Vani Kalyanaraman, K V Venkatesh, N Gautam

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Article
  3. Molecular regulation of PLCβ signaling.Methods in enzymology · 2023
    Review
  4. Review
  5. Live Cell Imaging and Optogenetics-Based Assays for GPCR Activity.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Review
  11. Band-pass processing in a GPCR signaling pathway selects for NFAT transcription factor activation.Integrative biology : quantitative biosciences from nano to macro · 2015
    Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Lopamudra GiriDepartment of Anesthesiology, Washington University School of Medicine, St. Louis, Missouri.
Anilkumar K PatelDepartment of Chemical Engineering, Indian Institute of Technology Bombay, Mumbai, India.
W K Ajith KarunarathneDepartment of Anesthesiology, Washington University School of Medicine, St. Louis, Missouri.
Vani KalyanaramanDepartment of Anesthesiology, Washington University School of Medicine, St. Louis, Missouri.
K V VenkateshDepartment of Chemical Engineering, Indian Institute of Technology Bombay, Mumbai, India. Electronic address: venks@iitb.ac.in.
N GautamDepartment of Anesthesiology, Washington University School of Medicine, St. Louis, Missouri; Department of Genetics, Washington University School of Medicine, St. Louis, Missouri. Electronic address: gautam@wustl.edu.
Washington University in St. Louis · USIndian Institute of Technology Bombay · IN

Funding

SIGNALING IN LIVING CELLSR01GM069027 · NIGMS · WASHINGTON UNIVERSITY · PI GAUTAM, NARASIMHAN · 2004 to 2016
$3.2M
G PROTEIN SUBUNIT FUNCTIONR01GM080558 · NIGMS · WASHINGTON UNIVERSITY · PI GAUTAM, NARASIMHAN · 2008 to 2011
$1.8M
NIGMS NIH HHS GM069027NIGMS NIH HHS GM08055NIGMS NIH HHS R01 GM069027NIGMS NIH HHS R01 GM080558
6 · The paper itself

Abstract

G-protein βγ subunits translocate reversibly from the plasma membrane to internal membranes on receptor activation. Translocation rates differ depending on the γ subunit type. There is limited understanding of the role of the differential rates of Gβγ translocation in modulating signaling dynamics in a cell. Bifurcation analysis of the calcium oscillatory network structure predicts that the translocation rate of a signaling protein can regulate the damping of system oscillation. Here, we examined whether the Gβγ translocation rate regulates calcium oscillations induced by G-protein-coupled receptor activation. Oscillations in HeLa cells expressing γ subunit types with different translocation rates were imaged and quantitated. The results show that differential Gβγ translocation rates can underlie the diversity in damping characteristics of calcium oscillations among cells. Mathematical modeling shows that a translocation embedded motif regulates damping of G-protein-mediated calcium oscillations consistent with experimental data. The current study indicates that such a motif may act as a tuning mechanism to design oscillations with varying damping patterns by using intracellular translocation of a signaling component.

Indexed as

Calcium SignalingModels, BiologicalCell MembraneFeedback, PhysiologicalGTP-Binding Protein beta SubunitsGTP-Binding Protein gamma SubunitsHeLa CellsHumansG-protein Beta gammaGTP-Binding Protein beta SubunitsGTP-Binding Protein gamma Subunits

Identifiers

PMID24988358
PMCPMC4119271
OpenAlexW2074179729

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.