Evidence map›Paper›PMID 24988337›Full record

ArticleBiophysical journal2014

Protein mobility within secretory granules.

Annita Ngatchou Weiss, Mary A Bittner, Ronald W Holz, Daniel Axelrod

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Neuroendocrine Targeting of Tissue Plasminogen Activator (t-PA).Journal of neurological disorders & stroke · 2020
    Article
  7. Review
  8. Article
  9. Amyotrophic lateral sclerosis-linked mutations increase the viscosity of liquid-like TDP-43 RNP granules in neurons.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  10. Article
  11. It's what's inside that matters.Biophysical journal · 2014
    Article
  12. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Annita Ngatchou WeissDepartment of Pharmacology, University of Michigan, Ann Arbor, Michigan. Electronic address: annweiss@umich.edu.
Mary A BittnerDepartment of Pharmacology, University of Michigan, Ann Arbor, Michigan.
Ronald W HolzDepartment of Pharmacology, University of Michigan, Ann Arbor, Michigan. Electronic address: holz@umich.edu.
Daniel AxelrodDepartment of Pharmacology, University of Michigan, Ann Arbor, Michigan; Department of Physics and LSA Biophysics, University of Michigan, Ann Arbor, Michigan.
University of Michigan · US

Funding

TRAINING IN MOLECULAR AND CELLULAR CARDIOLOGYT32HL007853 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI David J. Pinsky · 1996 to 2026
$11.6M
The Plasma Membrane-Granule Interface in ExocytosisR01NS038129 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HOLZ, RONALD W · 1999 to 2010
$2.5M
New optical approaches to study secretory granule structure and functionR21NS073686 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI AXELROD, DANIEL, HOLZ, RONALD W · 2011 to 2012
$420k
The Plasma Membrane-Granule Interface in ExocytosisR56NS038129 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HOLZ, RONALD W · 2011 to 2011
$388k
NHLBI NIH HHS T32 HL007853NHLBI NIH HHS T32-HL-007853NINDS NIH HHS R01 NS038129NINDS NIH HHS R01-NS38129NINDS NIH HHS R21 NS073686NINDS NIH HHS R21-NS073686NINDS NIH HHS R56 NS038129NINDS NIH HHS R56-NS38129
6 · The paper itself

Abstract

We investigated the basis for previous observations that fluorescent-labeled neuropeptide Y (NPY) is usually released within 200 ms after fusion, whereas labeled tissue plasminogen activator (tPA) is often discharged over many seconds. We found that tPA and NPY are endogenously expressed in small and different subpopulations of bovine chromaffin cells in culture. We measured the mobility of these proteins (tagged with fluorophore) within the lumen of individual secretory granules in living chromaffin cells, and related their mobilities to postfusion release kinetics. A method was developed that is not limited by standard optical resolution, in which a bright flash of strongly decaying evanescent field (∼64 nm exponential decay constant) produced by total internal reflection (TIR) selectively bleaches cerulean-labeled protein proximal to the glass coverslip within individual granules. Fluorescence recovery occurred as unbleached protein from distal regions within the 300 nm granule diffused into the bleached proximal regions. The fractional bleaching of tPA-cerulean (tPA-cer) was greater when subsequently probed with TIR excitation than with epifluorescence, indicating that tPA-cer mobility was low. The almost equal NPY-cer bleaching when probed with TIR and epifluorescence indicated that NPY-cer equilibrated within the 300 ms bleach pulse, and therefore had a greater mobility than tPA-cer. TIR-fluorescence recovery after photobleaching revealed a significant recovery of tPA-cer (but not NPY-cer) fluorescence within several hundred milliseconds after bleaching. Numerical simulations, which take into account bleach duration, granule diameter, and the limited number of fluorophores in a granule, are consistent with tPA-cer being 100% mobile, with a diffusion coefficient of 2 × 10(-10) cm(2)/s (∼1/3000 of that for a protein of similar size in aqueous solution). However, the low diffusive mobility of tPA cannot alone explain its slow postfusion release. In the accompanying study, we suggest that, additionally, tPA itself stabilizes the fusion pore with dimensions that restrict its own exit.

Indexed as

AnimalsCattleCells, CulturedChromaffin CellsFluorescence Recovery After PhotobleachingNeuropeptide YProtein TransportSecretory PathwaySecretory VesiclesNeuropeptide Y

Identifiers

PMID24988337
PMCPMC4478961
OpenAlexW2015076559

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.