Evidence map›Paper›PMID 24987692›Full record

ArticleBioMed research international2014

Contrasted reactivity to oxygen tensions in Frankia sp. strain CcI3 throughout nitrogen fixation and assimilation.

Faten Ghodhbane-Gtari, Karima Hezbri, Amir Ktari, Imed Sbissi, Nicholas Beauchemin, Maher Gtari, Louis S Tisa

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Comparative metagenomics of wild and cultivatedCurrent research in microbial sciences · 2025
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  2. An overview ofApplied and environmental microbiology · 2024
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Faten Ghodhbane-GtariLaboratoire Microorganismes et Biomolécules Actives, Université Tunis El Manar (FST) and Université Carthage (INSAT), Campus Universitaire, 2092 Tunis, Tunisia ; Department of Molecular, Cellular & Biomedical Sciences, University of New Hampshire, 46 College Road, Durham, NH 03824-2617, USA.
Karima HezbriLaboratoire Microorganismes et Biomolécules Actives, Université Tunis El Manar (FST) and Université Carthage (INSAT), Campus Universitaire, 2092 Tunis, Tunisia.
Amir KtariLaboratoire Microorganismes et Biomolécules Actives, Université Tunis El Manar (FST) and Université Carthage (INSAT), Campus Universitaire, 2092 Tunis, Tunisia.
Imed SbissiLaboratoire Microorganismes et Biomolécules Actives, Université Tunis El Manar (FST) and Université Carthage (INSAT), Campus Universitaire, 2092 Tunis, Tunisia.
Nicholas BeaucheminDepartment of Molecular, Cellular & Biomedical Sciences, University of New Hampshire, 46 College Road, Durham, NH 03824-2617, USA.
Maher GtariLaboratoire Microorganismes et Biomolécules Actives, Université Tunis El Manar (FST) and Université Carthage (INSAT), Campus Universitaire, 2092 Tunis, Tunisia ; Department of Molecular, Cellular & Biomedical Sciences, University of New Hampshire, 46 College Road, Durham, NH 03824-2617, USA.
Louis S TisaDepartment of Molecular, Cellular & Biomedical Sciences, University of New Hampshire, 46 College Road, Durham, NH 03824-2617, USA.
Tunis El Manar University · TNNational Institute of Applied Science and Technology · TNUniversity of New Hampshire · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reconciling the irreconcilable is a primary struggle in aerobic nitrogen-fixing bacteria. Although nitrogenase is oxygen and reactive oxygen species-labile, oxygen tension is required to sustain respiration. In the nitrogen-fixing Frankia, various strategies have been developed through evolution to control the respiration and nitrogen-fixation balance. Here, we assessed the effect of different oxygen tensions on Frankia sp. strain CcI3 growth, vesicle production, and gene expression under different oxygen tensions. Both biomass and vesicle production were correlated with elevated oxygen levels under both nitrogen-replete and nitrogen-deficient conditions. The mRNA levels for the nitrogenase structural genes (nifHDK) were high under hypoxic and hyperoxic conditions compared to oxic conditions. The mRNA level for the hopanoid biosynthesis genes (sqhC and hpnC) was also elevated under hyperoxic conditions suggesting an increase in the vesicle envelope. Under nitrogen-deficient conditions, the hup2 mRNA levels increased with hyperoxic environment, while hup1 mRNA levels remained relatively constant. Taken together, these results indicate that Frankia protects nitrogenase by the use of multiple mechanisms including the vesicle-hopanoid barrier and increased respiratory protection.

Indexed as

Bacterial ProteinsFrankiaGene Expression RegulationGene Expression Regulation, EnzymologicNitrogenaseNitrogen FixationOxygenOxygen ConsumptionRNA, BacterialRNA, MessengerBacterial ProteinsNitrogenaseOxygenRNA, BacterialRNA, Messenger

Identifiers

PMID24987692
PMCPMC4058466
OpenAlexW2105653006

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.