Evidence map›Paper›PMID 24987674›Full record

Trial reportBioMed research international2014

Genome-wide screening of cytogenetic abnormalities in multiple myeloma patients using array-CGH technique: a Czech multicenter experience.

Jan Smetana, Jan Frohlich, Romana Zaoralova, Vladimira Vallova, Henrieta Greslikova, Renata Kupska, Pavel Nemec, Aneta Mikulasova, Martina Almasi, Ludek Pour and 5 more

Open access · hybridAbstract readClinical TrialMulticenter Study
In one paragraph

Trial report in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Potential Clinical Application of Genomics in Multiple Myeloma.International journal of molecular sciences · 2018
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Jan SmetanaDepartment of Experimental Biology, Faculty of Science, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic ; Babak Myeloma Group, Department of Pathological Physiology, Faculty of Medicine, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic.ORCID 0000-0002-3770-1754
Jan FrohlichDepartment of Experimental Biology, Faculty of Science, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic ; Babak Myeloma Group, Department of Pathological Physiology, Faculty of Medicine, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic.
Romana ZaoralovaBabak Myeloma Group, Department of Pathological Physiology, Faculty of Medicine, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic.ORCID 0000-0001-7449-7679
Vladimira VallovaDepartment of Experimental Biology, Faculty of Science, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic.
Henrieta GreslikovaBabak Myeloma Group, Department of Pathological Physiology, Faculty of Medicine, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic.
Renata KupskaBabak Myeloma Group, Department of Pathological Physiology, Faculty of Medicine, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic.
Pavel NemecDepartment of Experimental Biology, Faculty of Science, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic ; Babak Myeloma Group, Department of Pathological Physiology, Faculty of Medicine, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic.
Aneta MikulasovaDepartment of Experimental Biology, Faculty of Science, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic ; Babak Myeloma Group, Department of Pathological Physiology, Faculty of Medicine, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic.
Martina AlmasiBabak Myeloma Group, Department of Pathological Physiology, Faculty of Medicine, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic ; Department of Internal Hematooncology, University Hospital Brno, Bohunice, 62500 Brno, Czech Republic.
Ludek PourDepartment of Clinical Hematology, University Hospital Brno, Bohunice, 62500 Brno, Czech Republic.
Zdenek AdamDepartment of Clinical Hematology, University Hospital Brno, Bohunice, 62500 Brno, Czech Republic.
Viera SandeckaDepartment of Clinical Hematology, University Hospital Brno, Bohunice, 62500 Brno, Czech Republic.
Lenka ZahradováFaculty of Medicine, University of Ostrava and University Hospital Ostrava, Poruba, 70852 Ostrava, Czech Republic.
Roman HajekBabak Myeloma Group, Department of Pathological Physiology, Faculty of Medicine, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic ; Department of Internal Hematooncology, University Hospital Brno, Bohunice, 62500 Brno, Czech Republic ; Faculty of Medicine, University of Ostrava and University Hospital Ostrava, Poruba, 70852 Ostrava, Czech Republic.
Petr KuglikDepartment of Experimental Biology, Faculty of Science, Masaryk University Brno, Bohunice, 62500 Brno, Czech Republic.
Masaryk University · CZUniversity Hospital Brno · CZUniversity of Ostrava · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Characteristic recurrent copy number aberrations (CNAs) play a key role in multiple myeloma (MM) pathogenesis and have important prognostic significance for MM patients. Array-based comparative genomic hybridization (aCGH) provides a powerful tool for genome-wide classification of CNAs and thus should be implemented into MM routine diagnostics. We demonstrate the possibility of effective utilization of oligonucleotide-based aCGH in 91 MM patients. Chromosomal aberrations associated with effect on the prognosis of MM were initially evaluated by I-FISH and were found in 93.4% (85/91). Incidence of hyperdiploidy was 49.5% (45/91); del(13)(q14) was detected in 57.1% (52/91); gain(1)(q21) occurred in 58.2% (53/91); del(17)(p13) was observed in 15.4% (14/91); and t(4;14)(p16;q32) was found in 18.6% (16/86). Genome-wide screening using Agilent 44K aCGH microarrays revealed copy number alterations in 100% (91/91). Most common deletions were found at 13q (58.9%), 1p (39.6%), and 8p (31.1%), whereas gain of whole 1q was the most often duplicated region (50.6%). Furthermore, frequent homozygous deletions of genes playing important role in myeloma biology such as TRAF3, BIRC1/BIRC2, RB1, or CDKN2C were observed. Taken together, we demonstrated the utilization of aCGH technique in clinical diagnostics as powerful tool for identification of unbalanced genomic abnormalities with prognostic significance for MM patients.

Indexed as

Chromosome AberrationsGenome-Wide Association StudyAdultAgedAged, 80 and overComparative Genomic HybridizationCzech RepublicFemaleHumansMaleMiddle AgedMultiple MyelomaNeoplasm ProteinsPrognosisNeoplasm Proteins

Identifiers

PMID24987674
PMCPMC4060785
OpenAlexW2149663042

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.