Evidence map›Paper›PMID 24987293›Full record

ArticleBreeding science2014

Identification of QTLs associated with resistance to Phomopsis pod blight (Diaporthe toxica) in Lupinus albus.

Raymond Cowley, David J Luckett, Gavin J Ash, John D I Harper, Cina A Vipin, Harsh Raman, Simon Ellwood

Open access · diamondAbstract read
In one paragraph

Article in Breeding science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Genome-wide association study reveals white lupin candidate gene involved in anthracnose resistance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Raymond CowleyGraham Centre for Agricultural Innovation (an alliance between NSW Department of Primary Industries and Charles Sturt University) , Pine Gully Road, Wagga Wagga, NSW 2650 , Australia.
David J LuckettGraham Centre for Agricultural Innovation (an alliance between NSW Department of Primary Industries and Charles Sturt University) , Pine Gully Road, Wagga Wagga, NSW 2650 , Australia.
Gavin J AshGraham Centre for Agricultural Innovation (an alliance between NSW Department of Primary Industries and Charles Sturt University), School of Agricultural & Wine Sciences, Charles Sturt University , Locked Bag 588, Wagga Wagga, NSW 2650 , Australia.
John D I HarperGraham Centre for Agricultural Innovation (an alliance between NSW Department of Primary Industries and Charles Sturt University), School of Agricultural & Wine Sciences, Charles Sturt University , Locked Bag 588, Wagga Wagga, NSW 2650 , Australia.
Cina A VipinGraham Centre for Agricultural Innovation (an alliance between NSW Department of Primary Industries and Charles Sturt University), School of Agricultural & Wine Sciences, Charles Sturt University , Locked Bag 588, Wagga Wagga, NSW 2650 , Australia.
Harsh RamanGraham Centre for Agricultural Innovation (an alliance between NSW Department of Primary Industries and Charles Sturt University) , Pine Gully Road, Wagga Wagga, NSW 2650 , Australia.
Simon EllwoodAustralian Centre for Necrotrophic Fungal Pathogens, Curtin University , Perth , Western Australia.
Charles Sturt University · AUCurtin University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phomopsis blight in Lupinus albus is caused by a fungal pathogen, Diaporthe toxica. It can invade all plant parts, leading to plant material becoming toxic to grazing animals, and potentially resulting in lupinosis. Identifying sources of resistance and breeding for resistance remains the best strategy for controlling Phomopsis and reducing lupinosis risks. However, loci associated with resistance to Phomopsis blight have not yet been identified. In this study, quantitative trait locus (QTL) analysis identified genomic regions associated with resistance to Phomopsis pod blight (PPB) using a linkage map of L. albus constructed previously from an F8 recombinant inbred line population derived from a cross between Kiev-Mutant (susceptible to PPB) and P27174 (resistant to PPB). Phenotyping was undertaken using a detached pod assay. In total, we identified eight QTLs for resistance to PPB on linkage group (LG) 3, LG6, LG10, LG12, LG17 and LG27 from different phenotyping environments. However, at least one QTL, QTL-5 on LG10 was consistently detected in both phenotyping environments and accounted for up to 28.2% of the total phenotypic variance. The results of this study showed that the QTL-2 on LG3 interacts epistatically with QTL-5 and QTL-6, which map on LG10 and LG12, respectively.

Indexed as

anamorph Phomopsis leptostromiformisbroad-leaf lupinDArTmulti-phase experimentsRqtl

Identifiers

PMID24987293
PMCPMC4031113
OpenAlexW1974665603

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.