SynthesisMicrobial biotechnology2014
Determining the culturability of the rumen bacterial microbiome.
Synthesis in Microbial biotechnology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
85 citing papers in PubMed.
- Animal gut microbes and microbiomes in the 21st century and beyond.Science China. Life sciences · 2026Review
- In Vitro Evaluation of Spearmint Essential Oil (Animals : an open access journal from MDPI · 2026Article
- Enhancing the fiber degradation efficiency in dairy cattle rumen through engineered bacterial communities.Microbiome · 2026Article
- Effect of Different Diet Formulas on Production Performance and Rumen Bacterial Diversity of Fattening Beef Cattle.Molecular biotechnology · 2026Article
- Single-cell Genomic Analysis of Fiber-adhering Rumen Bacteria during an in situ Incubation of Timothy Hay.Microbes and environments · 2026Article
- Characterization of the gut microbiome of wildFrontiers in microbiomes · 2026Article
- The selective culture and enrichment of major rumen bacteria on three distinct anaerobic culture media.Microbiology spectrum · 2025Article
- Rumen Microbiota in Cattle and Buffaloes: Insights into Host-Specific Bacterial Diversity.Biology · 2025Article
- Subspecific variation in gut microbiota of North American bison in a sympatric setting reveals differentially abundant taxa.Animal microbiome · 2025Article
- Genomic evidence for flies as carriers of zoonotic pathogens on dairy farms.NPJ biofilms and microbiomes · 2025Article
- Microbial Rumen proteome analysis suggests Firmicutes and Bacteroidetes as key producers of lignocellulolytic enzymes and carbohydrate-binding modules.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025Article
- A metagenomic perspective on the microbial prokaryotic genome census.Science advances · 2025Article
- Host genotype-driven shifts in theFrontiers in microbiology · 2025Article
- Rumen microbiota succession throughout the perinatal period and its association with postpartum production traits in dairy cows: A review.Animal nutrition (Zhongguo xu mu shou yi xue hui) · 2024Review
- Effects of diets for three growing stages by rumen inocula donors onJournal of animal science and technology · 2024Article
- - Invited Review - The role of rumen microbiota in enteric methane mitigation for sustainable ruminant production.Animal bioscience · 2024Article
- Characteristics of rumen microbiota andFrontiers in microbiology · 2024Article
- Enhancing the Conventional Culture: the Evaluation of Several Culture Media and Growth Conditions Improves the Isolation of Ruminal Bacteria.Microbial ecology · 2023Article
- Alfalfa hay substitution for wheat straw improves beef quality via rumen microflora alteration.Heliyon · 2023Article
- Effects of Thymbra capitata essential oil on in vitro fermentation end-products and ruminal bacterial communities.Scientific reports · 2023Article
25 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors.
Funding
Abstract
The goal of the Hungate1000 project is to generate a reference set of rumen microbial genome sequences. Toward this goal we have carried out a meta-analysis using information from culture collections, scientific literature, and the NCBI and RDP databases and linked this with a comparative study of several rumen 16S rRNA gene-based surveys. In this way we have attempted to capture a snapshot of rumen bacterial diversity to examine the culturable fraction of the rumen bacterial microbiome. Our analyses have revealed that for cultured rumen bacteria, there are many genera without a reference genome sequence. Our examination of culture-independent studies highlights that there are few novel but many uncultured taxa within the rumen bacterial microbiome. Taken together these results have allowed us to compile a list of cultured rumen isolates that are representative of abundant, novel and core bacterial species in the rumen. In addition, we have identified taxa, particularly within the phylum Bacteroidetes, where further cultivation efforts are clearly required. This information is being used to guide the isolation efforts and selection of bacteria from the rumen microbiota for sequencing through the Hungate1000.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.