Evidence map›Paper›PMID 24986077›Full record

ArticleVirology journal2014

Small molecules that inhibit Vif-induced degradation of APOBEC3G.

Masashi Matsui, Keisuke Shindo, Taisuke Izumi, Katsuhiro Io, Masanobu Shinohara, Jun Komano, Masayuki Kobayashi, Norimitsu Kadowaki, Reuben S Harris, Akifumi Takaori-Kondo

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
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  6. Structural Determinants of the APOBEC3G N-Terminal Domain for HIV-1 RNA Association.Frontiers in cellular and infection microbiology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Masashi Matsui
Keisuke ShindoDepartment of Hematology and Oncology, Graduate School of Medicine, Kyoto University, 54 Shogoin-Kawaracho, Sakyo-ku, Kyoto 606-8507, Japan. shind009@kuhp.kyoto-u.ac.jp.
Taisuke Izumi
Katsuhiro Io
Masanobu Shinohara
Jun Komano
Masayuki Kobayashi
Norimitsu Kadowaki
Reuben S Harris
Akifumi Takaori-Kondo
Kyoto University · JPKyoto University of Education · JPNational Institute of Infectious Diseases · JPSan Francisco AIDS Foundation · USUniversity of Minnesota · US

Funding

Structural Characterization of APOBECS's Atomic interactionsP01GM091743 · NIGMS · UNIVERSITY OF MINNESOTA · PI KOTLER, MOSHE · 2011 to 2015
$10.1M
NIGMS NIH HHS P01 GM091743
6 · The paper itself

Abstract

backgroundHIV-1 Vif is essential for virus replication in natural target cells such as T cells and macrophages. Vif recruits a ubiquitin ligase to degrade restrictive APOBEC3 proteins. APOBEC3G is one of the most potent retroviral restriction factors targeted by Vif and, as such, the Vif-APOBEC3G interaction has emerged as a promising HIV-1 therapeutic target.

methods20,000 small molecules were used in live-cell screens for those that preserve EGFP-APOBEC3G fluorescence and luciferase-APOBEC3G luminescence in the presence of HIV-1 Vif.

results2 compounds with similar core structures preserved APOBEC3G levels in the presence of Vif. 10 μM of compound restored APOBEC3G to levels sufficient for incorporation into vif-proficient virus particles and restriction of virus infectivity. Vif-dependent APOBEC3G polyubiquitination and general proteasomal activity were unaffected at the same concentration.

conclusionsThe small molecules described here preserve APOBEC3G levels and activity in the presence of Vif. These molecules are starting points for further development as antiretrovirals.

Indexed as

Antiviral AgentsAPOBEC-3G DeaminaseCytidine DeaminaseDrug Evaluation, PreclinicalEnzyme InhibitorsProteolysisvif Gene Products, Human Immunodeficiency VirusAntiviral AgentsAPOBEC-3G DeaminaseAPOBEC3G protein, humanCytidine DeaminaseEnzyme Inhibitorsvif Gene Products, Human Immunodeficiency Virusvif protein, Human immunodeficiency virus 1

Identifiers

PMID24986077
PMCPMC4085377
OpenAlexW2105531386

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.