Evidence map›Paper›PMID 24985973›Full record

ArticleMolecular biology reports2014

PTPN22 1858C>T gene polymorphism in patients with SLE: association with serological and clinical results.

Lidia Ostanek, Magdalena Ostanek-Pańka, Danuta Bobrowska-Snarska, Agnieszka Bińczak-Kuleta, Katarzyna Fischer, Mariusz Kaczmarczyk, Andrzej Ciechanowicz, Marek Brzosko

Abstract read
In one paragraph

Article in Molecular biology reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Association of the single nucleotide polymorphism C1858T of theInternational journal of reproductive biomedicine · 2021
    Article
  4. Review
  5. Review
  6. Genetics of Antiphospholipid Syndrome.Current rheumatology reports · 2019
    Review
  7. The Contribution of PTPN22 to Rheumatic Disease.Arthritis & rheumatology (Hoboken, N.J.) · 2019
    Review
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lidia OstanekDepartment of Rheumatology and Internal Medicine, Pomeranian Medical University, Szczecin, Poland, ostanekl@gmail.com.
Magdalena Ostanek-Pańka
Danuta Bobrowska-Snarska
Agnieszka Bińczak-Kuleta
Katarzyna Fischer
Mariusz Kaczmarczyk
Andrzej Ciechanowicz
Marek Brzosko

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To assess the association between PTPN22 1858C>T gene polymorphism and susceptibility to, and clinical presentation of, systemic lupus erythematosus (SLE). Our study included 135 SLE patients (120 women and 15 men; mean age 45.1 years; mean course of disease from 0.5 to 31 years) and 201 healthy subjects. The PTPN22 1858C>T gene polymorphism was genotyped by polymerase chain reaction restriction fragment length polymorphism. A significantly higher incidence of genotype CT in patients with SLE (36.3 %) was found, compared with the control group (24.9 %). The frequencies of C1858 and T1858 alleles were 78.1 and 21.9 % in SLE patients and 86.1 and 13.9 % in controls, respectively. Significantly higher SLE susceptibility was observed in patients carrying at least one T allele (p = 0.009; OR 1.86; 95 % CI 0.14-3.05). Significant association of the PTPN22 T1858 allele (CT + TT vs.CC) and secondary antiphospholipid syndrome was observed (p = 0.049). In SLE patients carrying the T1858 allele, higher levels of antiphospholipid antibodies (anticardiolipin antibodies and/or lupus anticoagulant) were found (p = 0.030; OR 2.17; 95 % CI 1.07-4.44).

Indexed as

Polymorphism, GeneticAdultAllelesCase-Control StudiesFemaleGenetic Predisposition to DiseaseGenotypeHumansLogistic ModelsLupus Erythematosus, SystemicMaleMiddle AgedPolymerase Chain ReactionPolymorphism, Restriction Fragment LengthProtein Tyrosine Phosphatase, Non-Receptor Type 22Protein Tyrosine Phosphatase, Non-Receptor Type 22PTPN22 protein, human

Identifiers

PMID24985973
PMCPMC4141968

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.