Evidence map›Paper›PMID 24983625›Full record

ArticlePloS one2014

Analysis of altered microRNA expression profiles in proximal renal tubular cells in response to calcium oxalate monohydrate crystal adhesion: implications for kidney stone disease.

Bohan Wang, Bolin Wu, Jun Liu, Weimin Yao, Ding Xia, Lu Li, Zhiqiang Chen, Zhangqun Ye, Xiao Yu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Noncoding RNA, friend or foe for nephrolithiasis?Frontiers in cell and developmental biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Bohan WangDepartment of Urinary Surgery, Affiliated Second Hospital of Zhejiang University, Hangzhou, Zhejiang Province, China.
Bolin WuDepartment of Urinary Surgery, Tongji Hospital of Huazhong University of Science and Technology, Wuhan, Hubei Province, China.
Jun LiuDepartment of Urinary Surgery, Suining Centre Hospital, Suining, Sichuan Province, China.
Weimin YaoDepartment of Urinary Surgery, Tongji Hospital of Huazhong University of Science and Technology, Wuhan, Hubei Province, China.
Ding XiaDepartment of Urinary Surgery, Tongji Hospital of Huazhong University of Science and Technology, Wuhan, Hubei Province, China.
Lu LiDepartment of Urinary Surgery, Tongji Hospital of Huazhong University of Science and Technology, Wuhan, Hubei Province, China.
Zhiqiang ChenDepartment of Urinary Surgery, Tongji Hospital of Huazhong University of Science and Technology, Wuhan, Hubei Province, China.
Zhangqun YeDepartment of Urinary Surgery, Tongji Hospital of Huazhong University of Science and Technology, Wuhan, Hubei Province, China.
Xiao YuDepartment of Urinary Surgery, Tongji Hospital of Huazhong University of Science and Technology, Wuhan, Hubei Province, China.
Tongji Hospital · CNHuazhong University of Science and Technology · CNSecond Affiliated Hospital of Zhejiang University · CNSuizhou Central Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCalcium oxalate monohydrate (COM) is the major crystalline component in kidney stones and its adhesion to renal tubular cells leads to tubular injury. However, COM-induced toxic effects in renal tubular cells remain ambiguous. MicroRNAs (miRNAs) play an important role in gene regulation at the posttranscriptional levels.

objectiveThe present study aimed to assess the potential changes in microRNAs of proximal renal tubular cells in response to the adhesion of calcium oxalate monohydrate (COM) crystals. METHODOLOGY: Lactate dehydrogenase (LDH) activity and DAPI staining were used to measure the toxic effects of HK-2 cells exposed to COM crystals. MicroRNA microarray and mRNA microarray were applied to evaluate the expression of HK-2 cells exposed to COM crystals. Quantitative real-time PCR (qRT-PCR) technology was used to validate the microarray results. Target prediction, Gene Ontology (GO) analysis and pathway analysis were applied to predict the potential roles of microRNAs in biological processes. PRINCIPAL

findingsOur study showed that COM crystals significantly altered the global expression profile of miRNAs in vitro. After 24 h treatment with a dose (1 mmol/L), 25 miRNAs were differentially expressed with a more than 1.5-fold change, of these miRNAs, 16 were up-regulated and 9 were down-regulated. A majority of these differentially expressed miRNAs were associated with cell death, mitochondrion and metabolic process. Target prediction and GO analysis suggested that these differentially expressed miRNAs potentially targeted many genes which were related to apoptosis, regulation of metabolic process, intracellular signaling cascade, insulin signaling pathway and type 2 diabetes.

conclusionOur study provides new insights into the role of miRNAs in the pathogenesis associated with nephrolithiasis.

Indexed as

TranscriptomeApoptosisCalcium OxalateCell LineHumansKidney CalculiKidney Tubules, ProximalMicroRNAsReal-Time Polymerase Chain ReactionSignal TransductionCalcium OxalateMicroRNAs

Identifiers

PMID24983625
PMCPMC4077747
OpenAlexW2024028239

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.