Evidence map›Paper›PMID 24983416›Full record

ArticleACS combinatorial science2014

Fragment-based library generation for the discovery of a peptidomimetic p53-Mdm4 inhibitor.

André Boltjes, Yijun Huang, Rob van de Velde, Laurie Rijkee, Siglinde Wolf, James Gaugler, Katarzyna Lesniak, Katarzyna Guzik, Tad A Holak, Alexander Dömling

Open access · greenAbstract read
In one paragraph

Article in ACS combinatorial science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
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  5. Review
  6. MCR synthesis of a tetracyclic tetrazole scaffold.Bioorganic & medicinal chemistry · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

André BoltjesDrug Design, University of Groningen , A. Deusinglaan 1, 9713 AV Groningen, Netherlands.
Yijun Huang
Rob van de Velde
Laurie Rijkee
Siglinde Wolf
James Gaugler
Katarzyna Lesniak
Katarzyna Guzik
Tad A Holak
Alexander Dömling
University of Groningen · NLJagiellonian University · PLUniversity of Pittsburgh · USMax Planck Institute of Biochemistry · DEMax Planck Society · DE

Funding

Real-time discovery of inhibitors among billion compounds for preview and downloadR01GM097082 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CAMACHO, CARLOS J. · 2011 to 2020
$2.5M
"Protein protein interaction directed libraries"P41GM094055 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GOLD, BARRY · 2010 to 2012
$1.1M
NIGMS NIH HHS 1R01GM097082-01NIGMS NIH HHS P41 GM094055NIGMS NIH HHS P41 GM094055-02NIGMS NIH HHS R01 GM097082
6 · The paper itself

Abstract

On the basis of our recently resolved first cocrystal structure of Mdm4 in complex with a small molecule inhibitor (PDB ID 3LBJ ), we devised an approach for the generation of potential Mdm4 selective ligands. We performed the Ugi four-component reaction (Ugi-4CR) in 96-well plates with an indole fragment, which is specially designed to mimic Trp23, a key amino acid for the interaction between p53 and Mdm4. Generally the reaction yielded mostly precipitates collected by 96-well filter plates. The best hit compound was found to be active and selective for Mdm4 (Ki=5 μM, 10-fold stronger than Mdm2). This initial hit may serve as the starting point for designing selective p53-Mdm4 inhibitor with higher affinity.

Indexed as

Drug DiscoveryHumansLigandsModels, MolecularMolecular Docking SimulationPeptidomimeticsProtein Interaction MapsProto-Oncogene Proteins c-mdm2Tumor Suppressor Protein p53LigandsMDM2 protein, humanPeptidomimeticsProto-Oncogene Proteins c-mdm2Tumor Suppressor Protein p53

Identifiers

PMID24983416
PMCPMC4130243
OpenAlexW2057173673

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.