Evidence map›Paper›PMID 24983354›Full record

ArticlePloS one2014

Novel host-related virulence factors are encoded by squirrelpox virus, the main causative agent of epidemic disease in red squirrels in the UK.

Alistair C Darby, Colin J McInnes, Karina Hansen Kjær, Ann R Wood, Margaret Hughes, Pia Møller Martensen, Alan D Radford, Neil Hall, Julian Chantrey

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. The Many Faces of Oligoadenylate Synthetases.Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research · 2023
    Review
  5. Article
  6. Health Status of the Eastern Grey Squirrel (Animals : an open access journal from MDPI · 2022
    Article
  7. A Peek into the Bacterial Microbiome of the Eurasian Red Squirrel (Animals : an open access journal from MDPI · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. cGAS and CD-NTase enzymes: structure, mechanism, and evolution.Current opinion in structural biology · 2019
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Alistair C DarbyUniversity of Liverpool, Liverpool, United Kingdom.
Colin J McInnesMoredun Research Institute, Penicuik, United Kingdom.
Karina Hansen KjærUniversity of Aarhus, Aarhus, Denmark.
Ann R WoodMoredun Research Institute, Penicuik, United Kingdom.
Margaret HughesUniversity of Liverpool, Liverpool, United Kingdom.
Pia Møller MartensenUniversity of Aarhus, Aarhus, Denmark.
Alan D RadfordUniversity of Liverpool, Liverpool, United Kingdom.
Neil HallUniversity of Liverpool, Liverpool, United Kingdom; King Abdulaziz University, Jeddah, Saudi Arabia.
Julian ChantreyUniversity of Liverpool, Liverpool, United Kingdom.
University of Liverpool · GBAarhus University · DKMoredun Research Institute · GBKing Abdulaziz University · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Squirrelpox virus (SQPV) shows little evidence for morbidity or mortality in North American grey squirrels (Sciurus carolinensis), in which the virus is endemic. However, more recently the virus has emerged to cause epidemics with high mortality in Eurasian red squirrels (S. vulgaris) in Great Britain, which are now threatened. Here we report the genome sequence of SQPV. Comparison with other Poxviridae revealed a core set of poxvirus genes, the phylogeny of which showed SQPV to be in a new Chordopoxvirus subfamily between the Molluscipoxviruses and Parapoxviruses. A number of SQPV genes were related to virulence, including three major histocomaptibility class I homologs, and one CD47 homolog. In addition, a novel potential virulence factor showing homology to mammalian oligoadenylate synthetase (OAS) was identified. This family of proteins normally causes activation of an endoribonuclease (RNaseL) within infected cells. The putative function of this novel SQPV protein was predicted in silico.

Indexed as

ChordopoxvirinaeAnimal DiseasesAnimalsPoxviridae InfectionsSciuridaeSequence Homology, Amino AcidUnited KingdomViral ProteinsVirulence FactorsViral ProteinsVirulence Factors

Identifiers

PMID24983354
PMCPMC4077651
OpenAlexW1984389416

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.