Evidence map›Paper›PMID 24982889›Full record

ArticleBioMed research international2014

RNA-Seq identifies key reproductive gene expression alterations in response to cadmium exposure.

Hanyang Hu, Xing Lu, Xiang Cen, Xiaohua Chen, Feng Li, Shan Zhong

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hanyang HuDepartment of Medical Genetics, School of Basic Medical Science, Wuhan University, Wuhan 430071, China.
Xing LuDepartment of Medical Genetics, School of Basic Medical Science, Wuhan University, Wuhan 430071, China.
Xiang CenDepartment of Medical Genetics, School of Basic Medical Science, Wuhan University, Wuhan 430071, China.
Xiaohua ChenDepartment of Medical Genetics, School of Basic Medical Science, Wuhan University, Wuhan 430071, China.
Feng LiDepartment of Medical Genetics, School of Basic Medical Science, Wuhan University, Wuhan 430071, China.
Shan ZhongDepartment of Medical Genetics, School of Basic Medical Science, Wuhan University, Wuhan 430071, China.
Wuhan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cadmium is a common toxicant that is detrimental to many tissues. Although a number of transcriptional signatures have been revealed in different tissues after cadmium treatment, the genes involved in the cadmium caused male reproductive toxicity, and the underlying molecular mechanism remains unclear. Here we observed that the mice treated with different amount of cadmium in their rodent chow for six months exhibited reduced serum testosterone. We then performed RNA-seq to comprehensively investigate the mice testicular transcriptome to further elucidate the mechanism. Our results showed that hundreds of genes expression altered significantly in response to cadmium treatment. In particular, we found several transcriptional signatures closely related to the biological processes of regulation of hormone, gamete generation, and sexual reproduction, respectively. The expression of several testosterone synthetic key enzyme genes, such as Star, Cyp11a1, and Cyp17a1, were inhibited by the cadmium exposure. For better understanding of the cadmium-mediated transcriptional regulatory mechanism of the genes, we computationally analyzed the transcription factors binding sites and the mircoRNAs targets of the differentially expressed genes. Our findings suggest that the reproductive toxicity by cadmium exposure is implicated in multiple layers of deregulation of several biological processes and transcriptional regulation in mice.

Indexed as

Sequence Analysis, RNA3' Untranslated RegionsAnimalsBody WeightCadmiumGene Expression ProfilingGene Expression RegulationMaleMiceMicroRNAsPromoter Regions, GeneticReproducibility of ResultsReproductionTestisTestosteroneTranscription Factors3' Untranslated RegionsCadmiumMicroRNAsTestosteroneTranscription Factors

Identifiers

PMID24982889
PMCPMC4058285
OpenAlexW2105506735

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.