Evidence map›Paper›PMID 24978025›Full record

ArticleNature communications2014

Molecular basis for bacterial peptidoglycan recognition by LysM domains.

Stéphane Mesnage, Mariano Dellarole, Nicola J Baxter, Jean-Baptiste Rouget, Jordan D Dimitrov, Ning Wang, Yukari Fujimoto, Andrea M Hounslow, Sébastien Lacroix-Desmazes, Koichi Fukase and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Nature communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 111 papers.

0numbers the graph read from it
0cells of the map it votes in
111citing papers in PubMed
21.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

111 citing papers in PubMed, 214 citations in OpenAlex.

  1. A lipid cue drives the subcellular localization of a self-inserting bacterial transmembrane protein.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  4. Outer Membrane-Peptidoglycan Anchoring inJournal of the American Chemical Society · 2026
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  7. A novel temperate phage fromMicrobiology spectrum · 2026
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  8. Review
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  13. Peptidoglycan LD-Transpeptidases.Antibiotics (Basel, Switzerland) · 2025
    Review
  14. Article
  15. Article
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  17. Article
  18. A Nasal Vaccine Displaying Anthrax Antigen on the Surface ofJournal of microbiology and biotechnology · 2025
    Article
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  20. Article

51 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

Stéphane Mesnage1] Krebs Institute, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK [2] Department of Molecular Biology and Biotechnology, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK.
Mariano Dellarole1] Centre de Biochimie Structurale, CNRS UMR 5048-UM 1-INSERM UMR 1054, F-34090 Montpellier, France [2] [3].
Nicola J Baxter1] Krebs Institute, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK [2] Department of Molecular Biology and Biotechnology, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK [3].
Jean-Baptiste RougetCentre de Biochimie Structurale, CNRS UMR 5048-UM 1-INSERM UMR 1054, F-34090 Montpellier, France.
Jordan D Dimitrov1] INSERM, U872, Centre de Recherche des Cordeliers, Equipe 16, F-75006 Paris, France [2] Université Pierre et Marie Curie, UMR-S 872, F-75006 Paris, France [3] Université Paris Descartes, UMR-S 872, F-75006 Paris, France.
Ning WangDepartment of Chemistry, Laboratory for Natural Products Chemistry, Osaka University, Osaka 560-0043, Japan.
Yukari FujimotoDepartment of Chemistry, Laboratory for Natural Products Chemistry, Osaka University, Osaka 560-0043, Japan.
Andrea M Hounslow1] Krebs Institute, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK [2] Department of Molecular Biology and Biotechnology, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK.
Sébastien Lacroix-Desmazes1] INSERM, U872, Centre de Recherche des Cordeliers, Equipe 16, F-75006 Paris, France [2] Université Pierre et Marie Curie, UMR-S 872, F-75006 Paris, France [3] Université Paris Descartes, UMR-S 872, F-75006 Paris, France.
Koichi FukaseDepartment of Chemistry, Laboratory for Natural Products Chemistry, Osaka University, Osaka 560-0043, Japan.
Simon J Foster1] Krebs Institute, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK [2] Department of Molecular Biology and Biotechnology, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK.
Michael P Williamson1] Krebs Institute, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK [2] Department of Molecular Biology and Biotechnology, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK.
University of Sheffield · GBOsaka University · JPCentre de Biologie Structurale · FRCentre de Recherche des Cordeliers · FR

Funding

Biotechnology and Biological Sciences Research Council BB/J014966/1
6 · The paper itself

Abstract

Carbohydrate recognition is essential for growth, cell adhesion and signalling in all living organisms. A highly conserved carbohydrate binding module, LysM, is found in proteins from viruses, bacteria, fungi, plants and mammals. LysM modules recognize polysaccharides containing N-acetylglucosamine (GlcNAc) residues including peptidoglycan, an essential component of the bacterial cell wall. However, the molecular mechanism underpinning LysM-peptidoglycan interactions remains unclear. Here we describe the molecular basis for peptidoglycan recognition by a multimodular LysM domain from AtlA, an autolysin involved in cell division in the opportunistic bacterial pathogen Enterococcus faecalis. We explore the contribution of individual modules to the binding, identify the peptidoglycan motif recognized, determine the structures of free and bound modules and reveal the residues involved in binding. Our results suggest that peptide stems modulate LysM binding to peptidoglycan. Using these results, we reveal how the LysM module recognizes the GlcNAc-X-GlcNAc motif present in polysaccharides across kingdoms.

Indexed as

Bacterial ProteinsEnterococcus faecalisPeptidoglycanProtein BindingProtein Structure, TertiaryBacterial ProteinsPeptidoglycan

Identifiers

PMID24978025
PMCPMC4083421
OpenAlexW2071870204

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.