Evidence map›Paper›PMID 24976889›Full record

ArticleStandards in genomic sciences2013

Permanent draft genome sequences of the symbiotic nitrogen fixing Ensifer meliloti strains BO21CC and AK58.

Marco Galardini, Marco Bazzicalupo, Emanuele Biondi, Eveline Brambilla, Matteo Brilli, David Bruce, Patrick Chain, Amy Chen, Hajnalka Daligault, Karen Walston Davenport and 22 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Standards in genomic sciences, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors.

Marco GalardiniDepartment of Biology, University of Firenze, via Madonna del Piano 6, I-50019, Sesto Fiorentino, Italy.
Marco BazzicalupoDepartment of Biology, University of Firenze, via Madonna del Piano 6, I-50019, Sesto Fiorentino, Italy.
Emanuele BiondiInterdisciplinary Research Institute - CNRS, Villenenuve d'Ascq, France.
Eveline BrambillaLeibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
Matteo BrilliEdmund Mach Foundation, San Michele all'Adige, Italy.
David BruceLos Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
Patrick ChainLos Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
Amy ChenDOE Joint Genome Institute, Walnut Creek, California, USA.
Hajnalka DaligaultLos Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
Karen Walston DavenportLos Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
Shweta DeshpandeDOE Joint Genome Institute, Walnut Creek, California, USA.
John C DetterLos Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
Lynne A GoodwinLos Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
Cliff HanLos Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
James HanDOE Joint Genome Institute, Walnut Creek, California, USA.
Marcel HuntemannDOE Joint Genome Institute, Walnut Creek, California, USA.
Natalia IvanovaDOE Joint Genome Institute, Walnut Creek, California, USA.
Hans-Peter KlenkLeibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
Nikos C KyrpidesDOE Joint Genome Institute, Walnut Creek, California, USA.
Victor MarkowitzDOE Joint Genome Institute, Walnut Creek, California, USA.
Kostas MavrommatisDOE Joint Genome Institute, Walnut Creek, California, USA.
Stefano MocaliConsiglio per la Ricerca e la Sperimentazione in Agricoltura - Centro di Ricerca per l'Agropedologia e la Pedologia, Firenze, Italy.
Matt NolanDOE Joint Genome Institute, Walnut Creek, California, USA.
Ioanna PaganiDOE Joint Genome Institute, Walnut Creek, California, USA.
Amrita PatiDOE Joint Genome Institute, Walnut Creek, California, USA.
Francesco PiniInterdisciplinary Research Institute - CNRS, Villenenuve d'Ascq, France.
Sam PitluckDOE Joint Genome Institute, Walnut Creek, California, USA.
Giulia SpiniDepartment of Biology, University of Firenze, via Madonna del Piano 6, I-50019, Sesto Fiorentino, Italy.
Ernest SzetoDOE Joint Genome Institute, Walnut Creek, California, USA.
Hazuki TeshimaLos Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
Tanja WoykeDOE Joint Genome Institute, Walnut Creek, California, USA.
Alessio MengoniDepartment of Biology, University of Firenze, via Madonna del Piano 6, I-50019, Sesto Fiorentino, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ensifer (syn. Sinorhizobium) meliloti is an important symbiotic bacterial species that fixes nitrogen. Strains BO21CC and AK58 were previously investigated for their substrate utilization and their plant-growth promoting abilities showing interesting features. Here, we describe the complete genome sequence and annotation of these strains. BO21CC and AK58 genomes are 6,985,065 and 6,974,333 bp long with 6,746 and 6,992 genes predicted, respectively.

Indexed as

Aerobicbiological nitrogen fixationchemoautotrophicchemoorganotrophicEnsifer (Sinorhizobium) melilotiGram-negativelegume yieldmesophilicmotileplant symbiontsoil

Identifiers

PMID24976889
PMCPMC4062632

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.