Evidence map›Paper›PMID 24974230›Full record

ArticleNature chemical biology2014

Autophagy induction enhances TDP43 turnover and survival in neuronal ALS models.

Sami J Barmada, Andrea Serio, Arpana Arjun, Bilada Bilican, Aaron Daub, D Michael Ando, Andrey Tsvetkov, Michael Pleiss, Xingli Li, Daniel Peisach and 3 more

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03359538 (Rapamycin), which is not on this map. Cited by 286 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
286citing papers in PubMed, 1 pooled it
23.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03359538 phase2completednot on this mapstarted 2017, after this paper: background citation

Rapamycin (Sirolimus) Treatment for Amyotrophic Lateral Sclerosis

TypeinterventionalSponsorAzienda Ospedaliero-Universitaria di ModenaRan2017 to 2022Enrolled63ConditionsAmyotrophic Lateral SclerosisArmsRapamycin, Placebo Oral Tablet
3 · Its place in the literature

Who cites it

286 citing papers in PubMed, 1 synthesis or guideline pooled it, 423 citations in OpenAlex.

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226 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 2 countries.

Sami J Barmada1] Gladstone Institute of Neurologic Disease, San Francisco, California, USA. [2] Department of Neurology, University of California-San Francisco Medical Center, San Francisco, California, USA. [3] Department of Neurology, University of Michigan, Ann Arbor, Michigan, USA.
Andrea Serio1] Euan MacDonald Centre for Motor Neurone Disease Research, University of Edinburgh, Edinburgh, Scotland, UK. [2] Medical Research Council Centre for Regenerative Medicine, University of Edinburgh, Edinburgh, Scotland, UK. [3] Departments of Materials and Bioengineering, and Institute for Biomedical Engineering, Imperial College, London, UK.
Arpana ArjunGladstone Institute of Neurologic Disease, San Francisco, California, USA.
Bilada Bilican1] Euan MacDonald Centre for Motor Neurone Disease Research, University of Edinburgh, Edinburgh, Scotland, UK. [2] Medical Research Council Centre for Regenerative Medicine, University of Edinburgh, Edinburgh, Scotland, UK.
Aaron DaubGladstone Institute of Neurologic Disease, San Francisco, California, USA.
D Michael Ando1] Gladstone Institute of Neurologic Disease, San Francisco, California, USA. [2] Biomedical Sciences Graduate Program, University of California-San Francisco, San Francisco, California, USA.
Andrey Tsvetkov1] Gladstone Institute of Neurologic Disease, San Francisco, California, USA. [2] Department of Neurobiology and Anatomy, University of Texas Medical School, Houston, Texas, USA.
Michael PleissKeck Program in Brain Cell Engineering, Gladstone Institutes, San Francisco, California, USA.
Xingli LiDepartment of Neurology, University of Michigan, Ann Arbor, Michigan, USA.
Daniel PeisachDepartment of Neurology, University of Michigan, Ann Arbor, Michigan, USA.
Christopher ShawInstitute of Psychiatry, King's College London, London, UK.
Siddharthan Chandran1] Euan MacDonald Centre for Motor Neurone Disease Research, University of Edinburgh, Edinburgh, Scotland, UK. [2] Medical Research Council Centre for Regenerative Medicine, University of Edinburgh, Edinburgh, Scotland, UK.
Steven Finkbeiner1] Gladstone Institute of Neurologic Disease, San Francisco, California, USA. [2] Department of Neurology, University of California-San Francisco Medical Center, San Francisco, California, USA. [3] Biomedical Sciences Graduate Program, University of California-San Francisco, San Francisco, California, USA. [4] Keck Program in Brain Cell Engineering, Gladstone Institutes, San Francisco, California, USA. [5] Department of Physiology, University of California-San Francisco, San Francisco, California, USA. [6] Taube-Koret Center for Neurodegenerative Disease Research, San Francisco, California, USA. [7] Hellman Family Foundation Alzheimer's Disease Research Program, San Francisco, California, USA. [8] Roddenberry Stem Cell Program, San Francisco, California, USA.
Gladstone Institutes · USUniversity of Edinburgh · GBUniversity of Michigan–Ann Arbor · USKing's College London · GBMott MacDonald (United Kingdom) · GBUniversity of California San Francisco Medical Center · US

Funding

MECHANISMS OF HUNTINGTIN-INDUCED NEURODEGENERATIONR01NS039074 · NINDS · J. DAVID GLADSTONE INSTITUTES · PI FINKBEINER, STEVEN M · 2000 to 2017
$5.4M
The Huntington's disease (HD) IPS consortiumU24NS078370 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI THOMPSON, LESLIE MICHELS · 2012 to 2013
$2.6M
EXTRAMULAR RESEARCH FACILITIES CONSTRUCTIONC06RR018928 · NCRR · J. DAVID GLADSTONE INSTITUTES · PI MAHLEY, ROBERT W. · 2003 to 2003
$2.1M
Automated longitudinal single cell analysisR01NS083390 · NINDS · J. DAVID GLADSTONE INSTITUTES · PI FINKBEINER, STEVEN M · 2013 to 2016
$1.6M
Physical Exam of Human Neurons to Identify Functions of the Druggable GenomeU01MH105035 · NIMH · J. DAVID GLADSTONE INSTITUTES · PI FINKBEINER, STEVEN M · 2014 to 2016
$1.5M
Elucidating the Mechanisms Underlying Mutant TDP43-induced NeurodegenerationK08NS072233 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BARMADA, SAMI · 2011 to 2015
$879k
Neuronal autophagy inducers as an approach to treat diseases of the central nervoR43NS081844 · NINDS · NANOSYN, INC. · PI FINKBEINER, STEVEN M, GREENHOUSE, ROBERT · 2013 to 2014
$700k
NEUROSCIENCE PROGRAMF30MH010501 · NIMH · UNIVERSITY OF ROCHESTER · PI BRENEMAN, STEPHEN M · 1993 to 1997
–
Motor Neurone Disease Association CHANDRAN/MAR10/982-797NCRR NIH HHS C06 RR018928NIMH NIH HHS U01 MH1050135NIMH NIH HHS U01 MH105035NINDS NIH HHS 3R01 NS039074NINDS NIH HHS K08 NS072233NINDS NIH HHS R01 NS039074NINDS NIH HHS R01 NS083390NINDS NIH HHS R43 NS081844NINDS NIH HHS U24 NS078370
6 · The paper itself

Abstract

Amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD) have distinct clinical features but a common pathology--cytoplasmic inclusions rich in transactive response element DNA-binding protein of 43 kDa (TDP43). Rare TDP43 mutations cause ALS or FTD, but abnormal TDP43 levels and localization may cause disease even if TDP43 lacks a mutation. Here we show that individual neurons vary in their ability to clear TDP43 and are exquisitely sensitive to TDP43 levels. To measure TDP43 clearance, we developed and validated a single-cell optical method that overcomes the confounding effects of aggregation and toxicity and discovered that pathogenic mutations shorten TDP43 half-life. New compounds that stimulate autophagy improved TDP43 clearance and localization and enhanced survival in primary murine neurons and in human stem cell-derived neurons and astrocytes harboring mutant TDP43. These findings indicate that the levels and localization of TDP43 critically determine neurotoxicity and show that autophagy induction mitigates neurodegeneration by acting directly on TDP43 clearance.

Indexed as

AutophagyAmino Acid SequenceAmyotrophic Lateral SclerosisAnimalsAstrocytesCells, CulturedCell SurvivalDNA-Binding ProteinsFluphenazineHalf-LifeHumansInduced Pluripotent Stem CellsMethotrimeprazineMiceMicrotubule-Associated ProteinsMolecular Sequence DataAnxa3 protein, ratDNA-Binding ProteinsFluphenazineMethotrimeprazineMicrotubule-Associated ProteinsSmall Molecule Libraries

Identifiers

PMID24974230
PMCPMC4106236
OpenAlexW1999522052

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.