Evidence map›Paper›PMID 24974229›Full record

ArticleNature chemical biology2014

Biosynthesis of polybrominated aromatic organic compounds by marine bacteria.

Vinayak Agarwal, Abrahim A El Gamal, Kazuya Yamanaka, Dennis Poth, Roland D Kersten, Michelle Schorn, Eric E Allen, Bradley S Moore

Abstract read
In one paragraph

Article in Nature chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 136 papers.

0numbers the graph read from it
0cells of the map it votes in
136citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

136 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Mining for Halogenated Metabolites ofJournal of natural products · 2025
    Article
  10. Jaspamide/Jasplakinolide Is Synthesized byJournal of natural products · 2025
    Article
  11. Review
  12. Article
  13. Unlocking the catalytic precision of ligand-controlled enzymatic halogenation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. Peptide halogenation biochemistry: interfacing pharmaceutical deliverables with chemical innovation.Medicinal chemistry research : an international journal for rapid communications on design and mechanisms of action of biologically active agents · 2025
    Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Elucidation of Chalkophomycin Biosynthesis RevealsJournal of the American Chemical Society · 2024
    Article

76 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Vinayak Agarwal1] Center for Oceans and Human Health, Scripps Institution of Oceanography, University of California-San Diego, La Jolla, California, USA. [2].
Abrahim A El Gamal1] Center for Oceans and Human Health, Scripps Institution of Oceanography, University of California-San Diego, La Jolla, California, USA. [2].
Kazuya Yamanaka1] Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California-San Diego, La Jolla, California, USA. [2].
Dennis PothCenter for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California-San Diego, La Jolla, California, USA.
Roland D Kersten1] Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California-San Diego, La Jolla, California, USA. [2].
Michelle SchornCenter for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California-San Diego, La Jolla, California, USA.
Eric E Allen1] Center for Oceans and Human Health, Scripps Institution of Oceanography, University of California-San Diego, La Jolla, California, USA. [2] Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California-San Diego, La Jolla, California, USA. [3] Division of Biological Sciences, University of California-San Diego, La Jolla, California, USA.
Bradley S Moore1] Center for Oceans and Human Health, Scripps Institution of Oceanography, University of California-San Diego, La Jolla, California, USA. [2] Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California-San Diego, La Jolla, California, USA. [3] Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California-San Diego, La Jolla, California, USA.

Funding

Training Program in Marine BiotechnologyT32GM067550 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GERWICK, WILLIAM HENRY · 2004 to 2019
$2.0M
Sources and Sins of Halogenated Organic Compounds in the Marine EnvironmentP01ES021921 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MOORE, BRADLEY S · 2012 to 2016
$1.9M
NCRR NIH HHS S10-RR031562NIEHS NIH HHS P01 ES021921NIEHS NIH HHS P01-ES021921NIGMS NIH HHS T32 GM067550NIGMS NIH HHS T32-GM067550
6 · The paper itself

Abstract

Polybrominated diphenyl ethers (PBDEs) and polybrominated bipyrroles are natural products that bioaccumulate in the marine food chain. PBDEs have attracted widespread attention because of their persistence in the environment and potential toxicity to humans. However, the natural origins of PBDE biosynthesis are not known. Here we report marine bacteria as producers of PBDEs and establish a genetic and molecular foundation for their production that unifies paradigms for the elaboration of bromophenols and bromopyrroles abundant in marine biota. We provide biochemical evidence of marine brominases revealing decarboxylative-halogenation enzymology previously unknown among halogenating enzymes. Biosynthetic motifs discovered in our study were used to mine sequence databases to discover unrealized marine bacterial producers of organobromine compounds.

Indexed as

Aquatic OrganismsGenome, BacterialHalogenated Diphenyl EthersHalogenationMolecular Sequence DataMultigene FamilyOxidoreductasesPseudoalteromonasPyrrolesHalogenated Diphenyl EthersOxidoreductasesPyrroles

Identifiers

PMID24974229
PMCPMC4104138

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.