Evidence map›Paper›PMID 24974037›Full record

ArticleMethods in cell biology2014

Determining absolute protein numbers by quantitative fluorescence microscopy.

Jolien Suzanne Verdaasdonk, Josh Lawrimore, Kerry Bloom

Open access · greenAbstract read
In one paragraph

Article in Methods in cell biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 58 citations in OpenAlex.

  1. Review
  2. Cell Growth and Division Shape mRNA-Protein Correlations.bioRxiv : the preprint server for biology · 2026
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  6. Review
  7. Presynaptic neurons self-tune by inversely coupling neurotransmitter release with the abundance of CaV2 voltage-gated CaProceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jolien Suzanne VerdaasdonkDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Josh LawrimoreDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Kerry BloomDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
University of North Carolina at Chapel Hill · US

Funding

NRSA IN GENETICST32GM007092 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SEKELSKY, JEFF J. · 1985 to 2019
$5.9M
Structure and Function of a Eukaryotic CentromereR37GM032238 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BLOOM, KERRY S, YEH, ELAINE YING · 2011 to 2020
$5.2M
NIGMS NIH HHS R37 GM032238NIGMS NIH HHS T32 GM007092
6 · The paper itself

Abstract

Biological questions are increasingly being addressed using a wide range of quantitative analytical tools to examine protein complex composition. Knowledge of the absolute number of proteins present provides insights into organization, function, and maintenance and is used in mathematical modeling of complex cellular dynamics. In this chapter, we outline and describe three microscopy-based methods for determining absolute protein numbers--fluorescence correlation spectroscopy, stepwise photobleaching, and ratiometric comparison of fluorescence intensity to known standards. In addition, we discuss the various fluorescently labeled proteins that have been used as standards for both stepwise photobleaching and ratiometric comparison analysis. A detailed procedure for determining absolute protein number by ratiometric comparison is outlined in the second half of this chapter. Counting proteins by quantitative microscopy is a relatively simple yet very powerful analytical tool that will increase our understanding of protein complex composition.

Indexed as

Cytoskeletal ProteinsFluorescence Recovery After PhotobleachingGreen Fluorescent ProteinsImage Processing, Computer-AssistedKinetochoresMicroscopy, FluorescencePhotobleachingReference StandardsSaccharomycetalesSignal-To-Noise RatioCytoskeletal Proteinsenhanced green fluorescent proteinGreen Fluorescent ProteinsCountingFCSFluorescenceFluorescence standardsPhotobleachingQuantitative imagingRatiometric

Identifiers

PMID24974037
PMCPMC4221264
OpenAlexW211879541

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.