Evidence map›Paper›PMID 24973653›Full record

ArticleUltramicroscopy2014

Multimodal nanoparticles as alignment and correlation markers in fluorescence/soft X-ray cryo-microscopy/tomography of nucleoplasmic reticulum and apoptosis in mammalian cells.

Christoph Hagen, Stephan Werner, Susana Carregal-Romero, Ashraf N Malhas, Barbara G Klupp, Peter Guttmann, Stefan Rehbein, Katja Henzler, Thomas C Mettenleiter, David J Vaux and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Ultramicroscopy, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
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  4. Soft X-ray tomography: virtual sculptures from cell cultures.Current opinion in structural biology · 2019
    Review
  5. Imaging cell morphology and physiology using X-rays.Biochemical Society transactions · 2019
    Review
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  9. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Christoph HagenOxford Particle Imaging Centre, Division of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK. Electronic address: christoph@strubi.ox.ac.uk.
Stephan WernerHelmholtz Zentrum Berlin für Materialien und Energie GmbH, Wilhelm-Conrad-Röntgen Campus, 12489 Berlin, Germany. Electronic address: stephan.werner@helmholtz-berlin.de.
Susana Carregal-RomeroFachbereich Physik, Philipps Universität Marburg, Marburg 35043, Germany. Electronic address: susana.carregal@physik.uni-marburg.de.
Ashraf N MalhasSir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, UK. Electronic address: ashraf.malhas@path.ox.ac.uk.
Barbara G KluppInstitute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut, 17493 Greifswald-Insel Riems, Germany. Electronic address: barbara.klupp@fli.bund.de.
Peter GuttmannHelmholtz Zentrum Berlin für Materialien und Energie GmbH, Wilhelm-Conrad-Röntgen Campus, 12489 Berlin, Germany. Electronic address: peter.guttmann@helmholtz-berlin.de.
Stefan RehbeinHelmholtz Zentrum Berlin für Materialien und Energie GmbH, Wilhelm-Conrad-Röntgen Campus, 12489 Berlin, Germany. Electronic address: stefan.rehbein@helmholtz-berlin.de.
Katja HenzlerHelmholtz Zentrum Berlin für Materialien und Energie GmbH, Wilhelm-Conrad-Röntgen Campus, 12489 Berlin, Germany. Electronic address: katja.henzler@helmholtz-berlin.de.
Thomas C MettenleiterInstitute of Molecular Virology and Cell Biology, Friedrich-Loeffler-Institut, 17493 Greifswald-Insel Riems, Germany. Electronic address: thomas.mettenleiter@fli.bund.de.
David J VauxSir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, UK. Electronic address: david.vaux@path.ox.ac.uk.
Wolfgang J ParakFachbereich Physik, Philipps Universität Marburg, Marburg 35043, Germany. Electronic address: wolfgang.parak@physik.uni-marburg.de.
Gerd SchneiderHelmholtz Zentrum Berlin für Materialien und Energie GmbH, Wilhelm-Conrad-Röntgen Campus, 12489 Berlin, Germany. Electronic address: gerd.schneider@helmholtz-berlin.de.
Kay GrünewaldOxford Particle Imaging Centre, Division of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK. Electronic address: kay@strubi.ox.ac.uk.
Helmholtz-Zentrum Berlin für Materialien und Energie · DECentre for Human Genetics · GBFriedrich-Loeffler-Institut · DEPhilipps University of Marburg · DEUniversity of Oxford · GB

Funding

Medical Research Council G0801917Wellcome Trust 060208/Z/00/ZWellcome Trust 090532/Z/09/ZWellcome Trust 090895Wellcome Trust 090895/Z/09/ZWellcome Trust 093305/Z/10/Z
6 · The paper itself

Abstract

Correlative fluorescence and soft X-ray cryo-microscopy/tomography on flat sample holders is perfectly suited to study the uncompromised physiological status of adherent cells at its best possible preservation by imaging after fast cryo-immobilization. To understand the mechanism by which herpesviruses induce nucleoplasmic reticulum, i.e. invaginations of the nuclear envelope, during their egress from the host cell nucleus, morphologically similar structures found in laminopathies and after chemical induction were investigated as a potentially more easily accessible model system. For example, anti-retroviral protease inhibitors like Saquinavir also induce invaginations of the nuclear membranes. With the help of newly designed multimodal nanoparticles as alignment and correlation markers, and by optimizing fluorescence cryo-microscopy data acquisition, an elaborate three-dimensional network of nucleoplasmic reticulum was demonstrated in nuclei of Saquinavir-treated rabbit kidney cells expressing a fluorescently labeled inner nuclear membrane protein. In part of the protease inhibitor-treated samples, nuclei exhibited dramatic ultrastructural changes indicative of programmed cell death/apoptosis. This unexpected observation highlights another unique feature of soft X-ray microscopy, i.e. high absorption contrast information not relying on labeled cellular components, at a 3D resolution of approximately 40 nm (half-pitch) and through a sample thickness of several micrometers. These properties make it a valuable part of the cell biology imaging toolbox to visualize the cellular ultrastructure in its completeness.

Indexed as

AnimalsApoptosisCell NucleusCryoelectron MicroscopyHIV Protease InhibitorsNanoparticlesNanotechnologyRabbitsSaquinavirTomography, X-Ray ComputedHIV Protease InhibitorsSaquinavirGold nanoparticlesHerpesvirus egressLive-cell imagingNuclear membrane invaginationsQuantum dotsX-ray imaging

Identifiers

PMID24973653
PMCPMC4181793
OpenAlexW1996201930

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.