Evidence map›Paper›PMID 24970932›Full record

Trial reportBlood2014

HLA-DRB1*07:01 is associated with a higher risk of asparaginase allergies.

Christian A Fernandez, Colton Smith, Wenjian Yang, Mihir Daté, Donald Bashford, Eric Larsen, W Paul Bowman, Chengcheng Liu, Laura B Ramsey, Tamara Chang and 16 more

4 registry-linked trialsAbstract readClinical TrialMulticenter Study
In one paragraph

Trial report in Blood, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 4 registered trials, which are not on this map. Cited by 61 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed, 1 pooled it
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00005603 phase3completednot on this map

ALinC 17: Protocol for Patients With Newly Diagnosed High Risk Acute Lymphoblastic Leukemia (ALL) - Evaluation of the Augmented BFM Regimen: A Phase III Study

TypeinterventionalSponsorChildren's Oncology GroupRan2000Enrolled276ConditionsLeukemiaArmsasparaginase, cyclophosphamide, cytarabine, daunorubicin hydrochloride, dexamethasone
NCT00075725 phase3completednot on this map

High Risk B-Precursor Acute Lymphoblastic Leukemia (ALL)

TypeinterventionalSponsorChildren's Oncology GroupRan2003 to 2021Enrolled3,154ConditionsAcute Lymphoblastic Leukemia, Adult B Acute Lymphoblastic Leukemia, Childhood B Acute Lymphoblastic LeukemiaArmsCyclophosphamide, Cytarabine, Daunorubicin Hydrochloride, Dexamethasone, Doxorubicin Hydrochloride
NCT00137111 phase3completednot on this map

Total XV - Total Therapy Study XV for Newly Diagnosed Patients With Acute Lymphoblastic Leukemia

TypeinterventionalSponsorSt. Jude Children's Research HospitalRan2000 to 2014Enrolled501ConditionsLymphoblastic Leukemia, AcuteArmsPrednisone, Dexamethasone, Vincristine, Daunorubicin, Doxorubicin, L-asparaginase, PEG-L-asparaginase, Erwinia asparaginase, Methotrexate, Cyclophosphamide, Cytarabine, Etoposide, Mercaptopurine, Imatinib, chemotherapy, intrathecal chemotherapy
NCT00549848 phase3completednot on this map

Total Therapy Study XVI for Newly Diagnosed Patients With Acute Lymphoblastic Leukemia

TypeinterventionalSponsorSt. Jude Children's Research HospitalRan2007 to 2022Enrolled600ConditionsAcute Lymphoblastic LeukemiaArmsPrednisone, Vincristine, Daunorubicin, PEG-L-asparaginase, Erwinia L-asparaginase, Doxorubicin, Cyclophosphamide, Cytarabine, Thioguanine, Clofarabine, Methotrexate, Mercaptopurine, Dexamethasone, Etoposide, Dasatinib
3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 1 synthesis or guideline pooled it, 109 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. A Structural In Silico Analysis of the Immunogenicity of L-Asparaginase fromInternational journal of molecular sciences · 2024
    Article
  13. Article
  14. In Silico Design of a Chimeric Humanized L-asparaginase.International journal of molecular sciences · 2023
    Article
  15. Article
  16. Evaluating the Frequencies ofThe application of clinical genetics · 2023
    Article
  17. 3 Biotech · 2022
    Article
  18. Review
  19. Review
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 11 institutions in 2 countries.

Christian A FernandezDepartment of Pharmaceutical Sciences, and.
Colton SmithDepartment of Pharmaceutical Sciences, and.
Wenjian YangDepartment of Pharmaceutical Sciences, and.
Mihir DatéDepartment of Structural Biology, St. Jude Children's Research Hospital, Memphis, TN;
Donald BashfordDepartment of Structural Biology, St. Jude Children's Research Hospital, Memphis, TN;
Eric LarsenMaine Children's Cancer Program, Scarborough, ME;
W Paul BowmanDepartment of Hematology and Oncology, Cook Children's Medical Center, Fort Worth, TX;
Chengcheng LiuDepartment of Pharmaceutical Sciences, and.
Laura B RamseyDepartment of Pharmaceutical Sciences, and.
Tamara ChangDepartment of Pharmaceutical Sciences, and.
Victoria TurnerDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, TN;
Mignon L LohDepartment of Pediatrics, University of California School of Medicine, San Francisco, CA;
Elizabeth A RaetzDepartment of Pediatrics, New York University Medical Center, NY;
Naomi J WinickUniversity of Texas Southwestern Medical Center, Dallas, TX;
Stephen P HungerSection of Pediatric Hematology/Oncology/Bone Marrow Transplantation and Center for Cancer and Blood Disorders, University of Colorado Denver School of Medicine, Children's Hospital Colorado, Aurora, CO;
William L CarrollDepartment of Pediatrics, New York University Medical Center, NY;
Suna Onengut-GumuscuCenter for Public Health Genomics, University of Virginia, Charlottesville, VA;
Wei-Min ChenCenter for Public Health Genomics, University of Virginia, Charlottesville, VA;
Patrick ConcannonGenetics Institute, University of Florida, Gainesville, FL;
Stephen S RichCenter for Public Health Genomics, University of Virginia, Charlottesville, VA;
Paul ScheetDepartment of Epidemiology, University of Texas M. D. Anderson Cancer Center, Houston, TX;
Sima JehaDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN; and.
Ching-Hon PuiDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, TN; and.
William E EvansDepartment of Pharmaceutical Sciences, and.
Meenakshi DevidasDepartment of Biostatistics, College of Medicine, University of Florida, Gainesville, FL.
Mary V RellingDepartment of Pharmaceutical Sciences, and.
Pharmaceutical Biotechnology (Czechia) · CZSt. Jude Children's Research Hospital · USUniversity of Virginia · USNew York University · USUniversity of Florida · USCook Children's Medical Center · USNew England Cancer Specialists · USThe University of Texas MD Anderson Cancer Center · USThe University of Texas Southwestern Medical Center · USUniversity of California, San Francisco · USUniversity of Colorado Denver · US

Funding

NCTN BIQSFP ANBL1531 (NRT)U10CA180886 · NCI · PUBLIC HEALTH INSTITUTE · PI Douglas S. Hawkins · 2014 to 2026
$390.6M
COG FOREIGN ACCRUALU10CA098543 · NCI · NATIONAL CHILDHOOD CANCER FOUNDATION · PI ADAMSON, PETER C. · 2003 to 2013
$335.5M
Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
COG SDMC - Statistics CoreU10CA180899 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI TODD A ALONZO · 2014 to 2026
$132.8M
Children's Oncology Group Statistics &Data Center GrantU10CA098413 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI DEVIDAS, MEENAKSHI · 2003 to 2013
$67.5M
Support for Human Specimen Banking in NCI-Supported Cancer Clinical TrialsU24CA114766 · NCI · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI RAMIREZ MILAN, NILSA DEL CARMEN · 2005 to 2014
$14.5M
PHARMACOGENOMICS OF CHILDHOOD LEUKEMIA (ALL)R37CA036401 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI EVANS, WILLIAM E · 1987 to 2014
$9.7M
PAARK4Kids-Pharmacogenomics of Anticancer Agents Research in ChildrenU01GM092666 · NIGMS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI RELLING, MARY V · 2010 to 2014
$8.9M
Glucocorticoids in Lymphoblastic LeukemiaR01CA142665 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI RELLING, MARY V · 2010 to 2020
$4.6M
Pharmacogenomics of Childhood Leukemia ALLR01CA036401 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI EVANS, WILLIAM E · 1985 to 2019
$3.6M
NCI NIH HHS CA114766NCI NIH HHS CA 142665NCI NIH HHS CA 21765NCI NIH HHS CA 36401NCI NIH HHS CA98413NCI NIH HHS CA98543NCI NIH HHS P30 CA021765NCI NIH HHS R01 CA036401NCI NIH HHS R01 CA142665NCI NIH HHS R37 CA036401NCI NIH HHS U10 CA098413NCI NIH HHS U10 CA098543NCI NIH HHS U10 CA180886NCI NIH HHS U10 CA180899NCI NIH HHS U24 CA114766NIGMS NIH HHS GM92666NIGMS NIH HHS U01 GM092666
6 · The paper itself

Abstract

Asparaginase is a therapeutic enzyme used to treat leukemia and lymphoma, with immune responses resulting in suboptimal drug exposure and a greater risk of relapse. To elucidate whether there is a genetic component to the mechanism of asparaginase-induced immune responses, we imputed human leukocyte antigen (HLA) alleles in patients of European ancestry enrolled on leukemia trials at St. Jude Children's Research Hospital (n = 541) and the Children's Oncology Group (n = 1329). We identified a higher incidence of hypersensitivity and anti-asparaginase antibodies in patients with HLA-DRB1*07:01 alleles (P = 7.5 × 10(-5), odds ratio [OR] = 1.64; P = 1.4 × 10(-5), OR = 2.92, respectively). Structural analysis revealed that high-risk amino acids were located within the binding pocket of the HLA protein, possibly affecting the interaction between asparaginase epitopes and the HLA-DRB1 protein. Using a sequence-based consensus approach, we predicted the binding affinity of HLA-DRB1 alleles for asparaginase epitopes, and patients whose HLA genetics predicted high-affinity binding had more allergy (P = 3.3 × 10(-4), OR = 1.38). Our results suggest a mechanism of allergy whereby HLA-DRB1 alleles that confer high-affinity binding to asparaginase epitopes lead to a higher frequency of reactions. These trials were registered at www.clinicaltrials.gov as NCT00137111, NCT00549848, NCT00005603, and NCT00075725.

Indexed as

AllelesAntibodiesDrug HypersensitivityHLA-DRB1 ChainsAdolescentAdultAntineoplastic AgentsAsparaginaseChildChild, PreschoolEpitopesFemaleHumansInfantLeukemiaMaleAntibodiesAntineoplastic AgentsAsparaginaseEpitopesHLA-DRB1*07 antigenHLA-DRB1 Chains

Identifiers

PMID24970932
PMCPMC4141516
OpenAlexW2154605350

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.