Evidence map›Paper›PMID 24968987›Full record

ArticleBiochimica et biophysica acta2014

Spectroscopic evidence for a 5-coordinate oxygenic ligated high spin ferric heme moiety in the Neisseria meningitidis hemoglobin binding receptor.

David Z Mokry, Angela Nadia-Albete, Michael K Johnson, Gudrun S Lukat-Rodgers, Kenton R Rodgers, William N Lanzilotta

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Chaperone-assisted cryo-EM structure ofbioRxiv : the preprint server for biology · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Heme Synthesis and Acquisition in Bacterial Pathogens.Journal of molecular biology · 2016
    Review
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

David Z MokryDepartment of Biochemistry & Molecular Biology, University of Georgia, Athens, GA 30602, USA.
Angela Nadia-AlbeteDepartment of Chemistry, University of Georgia, Athens, GA 30602, USA.
Michael K JohnsonDepartment of Chemistry, University of Georgia, Athens, GA 30602, USA.
Gudrun S Lukat-RodgersDepartment of Chemistry and Biochemistry, North Dakota State University, Fargo, ND 58108-6050, USA.
Kenton R RodgersDepartment of Chemistry and Biochemistry, North Dakota State University, Fargo, ND 58108-6050, USA.
William N LanzilottaDepartment of Biochemistry & Molecular Biology, University of Georgia, Athens, GA 30602, USA. Electronic address: wlanzilo@bmb.uga.edu.
University of Georgia · USNorth Dakota State University · US

Funding

Assembly and Repair of Biological Iron-Sulfur ClustersR37GM062524 · NIGMS · UNIVERSITY OF GEORGIA · PI JOHNSON, MICHAEL K. · 2014 to 2018
$1.7M
Study of heme uptake and transport proteins from P. aerugenosa and S. dysenteriaeR15AI072719 · NIAID · NORTH DAKOTA STATE UNIVERSITY · PI RODGERS, KENTON · 2007 to 2011
$707k
Determining the structural basis for the mechanism of catalytic O2 evolution by tR15GM094039 · NIGMS · NORTH DAKOTA STATE UNIVERSITY · PI LUKAT-RODGERS, GUDRUN SUSANNE · 2010 to 2010
$431k
NIAID NIH HHS AI072719NIAID NIH HHS R15 AI072719NIGMS NIH HHS GM094039NIGMS NIH HHS R15 GM094039NIGMS NIH HHS R37 GM062524
6 · The paper itself

Abstract

backgroundFor many pathogenic microorganisms, iron acquisition represents a significant stress during the colonization of a mammalian host. Heme is the single most abundant source of soluble iron in this environment. While the importance of iron assimilation for nearly all organisms is clear, the mechanisms by which heme is acquired and utilized by many bacterial pathogens, even those most commonly found at sites of infection, remain poorly understood.

methodsAn alternative protocol for the production and purification of the outer membrane hemoglobin receptor (HmbR) from the pathogen Neisseria meningitidis has facilitated a biophysical characterization of this outer membrane transporter by electronic absorption, circular dichroism, electron paramagnetic resonance, and resonance Raman techniques.

resultsHmbR co-purifies with 5-coordinate high spin ferric heme bound. The heme binding site accommodates exogenous imidazole as a sixth ligand, which results in a 6-coordinate, low-spin ferric species. Both the 5- and 6-coordinate complexes are reduced by sodium hydrosulfite. Four HmbR variants with a modest decrease in binding efficiency for heme have been identified (H87C, H280A, Y282A, and Y456C). These findings are consistent with an emerging paradigm wherein the ferric iron center of bound heme is coordinated by a tyrosine ligand.

conclusionIn summary, this study provides the first spectroscopic characterization for any heme or iron transporter in Neisseria meningitidis, and suggests a coordination environment heretofore unobserved in a TonB-dependent hemin transporter. GENERAL SIGNIFICANCE: A detailed understanding of the nutrient acquisition pathways in common pathogens such as N. meningitidis provides a foundation for new antimicrobial strategies.

Indexed as

Bacterial ProteinsBiological Transport, ActiveHemeIronNeisseria meningitidisProtein BindingReceptors, Cell SurfaceSpectrum AnalysisBacterial ProteinsHemeHmbR protein, Neisseria meningitidisIronReceptors, Cell SurfaceHeme transportHemoglobin receptorHmbRPathogenesisSeptic shockTon-B dependent transport

Identifiers

PMID24968987
PMCPMC4439194
OpenAlexW2021907462

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.