Evidence map›Paper›PMID 24968026›Full record

ArticlePloS one2014

Selection and characterization of a DNA aptamer that can discriminate between cJun/cJun and cJun/cFos.

Ryan D Walters, David T McSwiggen, James A Goodrich, Jennifer F Kugel

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ryan D WaltersDepartment of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, United States of America.
David T McSwiggenDepartment of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, United States of America.
James A GoodrichDepartment of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, United States of America.
Jennifer F KugelDepartment of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado, United States of America.
University of Colorado Boulder · US

Funding

TRAINING IN SIGNAL TRANSDUCTION &CELL CYCLE REGULATIONT32GM008759 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI AHN, NATALIE G. · 2000 to 2020
$5.9M
Predoctoral Training Program in Signaling and Cellular Regulation INCLUDE Down Syndrome SupplementT32GM142607 · NIGMS · UNIVERSITY OF COLORADO · PI Sabrina Leigh Spencer, Tin Tin Su · 2021 to 2026
$3.6M
REGULATION OF TRANSCRIPTION AT THE HUMAN IL2 PROMOTERR01GM055235 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI GOODRICH, JAMES · 1998 to 2011
$2.8M
NIGMS NIH HHS R01 GM055235NIGMS NIH HHS T32 GM008759NIGMS NIH HHS T32 GM08759NIGMS NIH HHS T32 GM142607
6 · The paper itself

Abstract

The AP-1 family of transcriptional activators plays pivotal roles in regulating a wide range of biological processes from the immune response to tumorigenesis. Determining the roles of specific AP-1 dimers in cells, however, has remained challenging because common molecular biology techniques are unable to distinguish between the role of, for example, cJun/cJun homodimers versus cJun/cFos heterodimers. Here we used SELEX (systematic evolution of ligands by exponential enrichment) to identify and characterize DNA aptamers that are >100-fold more specific for binding cJun/cJun compared to cJun/cFos, setting the foundation to investigate the biological functions of different AP-1 dimer compositions.

Indexed as

AnimalsAptamers, NucleotideBinding SitesCell LineGenes, ReporterInterleukin-2Nucleic Acid ConformationPromoter Regions, GeneticProtein BindingProtein MultimerizationProto-Oncogene Proteins c-fosProto-Oncogene Proteins c-junSELEX Aptamer TechniqueTranscription Factor AP-1Aptamers, NucleotideInterleukin-2Proto-Oncogene Proteins c-fosProto-Oncogene Proteins c-junTranscription Factor AP-1

Identifiers

PMID24968026
PMCPMC4072727
OpenAlexW2028006250

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.