Evidence map›Paper›PMID 24967584›Full record

ArticlePLoS genetics2014

Aberrant autolysosomal regulation is linked to the induction of embryonic senescence: differential roles of Beclin 1 and p53 in vertebrate Spns1 deficiency.

Tomoyuki Sasaki, Shanshan Lian, Jie Qi, Peter E Bayliss, Christopher E Carr, Jennifer L Johnson, Sujay Guha, Patrick Kobler, Sergio D Catz, Matthew Gill and 3 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 2 pooled it
–field-weighted citation impact, top 95% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 2 syntheses or guidelines pooled it, 2 citations in OpenAlex.

  1. Guideline
  2. Guideline
  3. Article
  4. Article
  5. SPNS1 is an essential cellular factor for EV-A71 by acting as a transporter of viral pocket factor.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Molecular basis of Spns1-mediated lysophospholipid transport from the lysosome.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Spns1 is an iron transporter essential for megalin-dependent endocytosis.American journal of physiology. Renal physiology · 2024
    Article
  9. Article
  10. Review
  11. Spns1 is a lysophospholipid transporter mediating lysosomal phospholipid salvage.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
  13. Article
  14. Autophagy coordinates chondrocyte development and early joint formation in zebrafish.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
    Article
  15. Review
  16. Article
  17. Article
  18. Autophagy in Drosophila and Zebrafish.Advances in experimental medicine and biology · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Tomoyuki SasakiDepartment of Metabolism & Aging, The Scripps Research Institute, Jupiter, Florida, United States of America.
Shanshan LianDepartment of Metabolism & Aging, The Scripps Research Institute, Jupiter, Florida, United States of America.
Jie QiDepartment of Metabolism & Aging, The Scripps Research Institute, Jupiter, Florida, United States of America.
Peter E BaylissCampbell Family Cancer Research Institute, Ontario Cancer Institute, Princess Margaret Cancer Centre, University Health Network, Toronto, Ontario, Canada.
Christopher E CarrDepartment of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Jennifer L JohnsonDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, California, United States of America.
Sujay GuhaDepartment of Metabolism & Aging, The Scripps Research Institute, Jupiter, Florida, United States of America.
Patrick KoblerDepartment of Biological Sciences, Florida Atlantic University, Jupiter, Florida, United States of America.
Sergio D CatzDepartment of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, California, United States of America.
Matthew GillDepartment of Metabolism & Aging, The Scripps Research Institute, Jupiter, Florida, United States of America.
Kailiang JiaDepartment of Biological Sciences, Florida Atlantic University, Jupiter, Florida, United States of America.
Daniel J KlionskyLife Sciences Institute, Department of Molecular, Cellular, and Developmental Biology, Department of Biological Chemistry, University of Michigan, Ann Arbor, Michigan, United States of America.
Shuji KishiDepartment of Metabolism & Aging, The Scripps Research Institute, Jupiter, Florida, United States of America.
Scripps Research Institute · USFlorida Atlantic University · USMassachusetts Institute of Technology · USPrincess Margaret Cancer Centre · CAUniversity of Michigan–Ann Arbor · US

Funding

Vesicular trafficking mechanisms regulating granulocyte functionR01HL088256 · NHLBI · SCRIPPS RESEARCH INSTITUTE, THE · PI Sergio Daniel Catz · 2009 to 2026
$9.0M
Modulators of granulocyte regulated secretion for control of inflammationR01GM105894 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI CATZ, SERGIO DANIEL, ROSEN, HUGH · 2013 to 2015
$1.1M
NHLBI NIH HHS R01 HL088256NIGMS NIH HHS R01 GM105894
6 · The paper itself

Abstract

Spinster (Spin) in Drosophila or Spinster homolog 1 (Spns1) in vertebrates is a putative lysosomal H+-carbohydrate transporter, which functions at a late stage of autophagy. The Spin/Spns1 defect induces aberrant autolysosome formation that leads to embryonic senescence and accelerated aging symptoms, but little is known about the mechanisms leading to the pathogenesis in vivo. Beclin 1 and p53 are two pivotal tumor suppressors that are critically involved in the autophagic process and its regulation. Using zebrafish as a genetic model, we show that Beclin 1 suppression ameliorates Spns1 loss-mediated senescence as well as autophagic impairment, whereas unexpectedly p53 deficit exacerbates both of these characteristics. We demonstrate that 'basal p53' activity plays a certain protective role(s) against the Spns1 defect-induced senescence via suppressing autophagy, lysosomal biogenesis, and subsequent autolysosomal formation and maturation, and that p53 loss can counteract the effect of Beclin 1 suppression to rescue the Spns1 defect. By contrast, in response to DNA damage, 'activated p53' showed an apparent enhancement of the Spns1-deficient phenotype, by inducing both autophagy and apoptosis. Moreover, we found that a chemical and genetic blockage of lysosomal acidification and biogenesis mediated by the vacuolar-type H+-ATPase, as well as of subsequent autophagosome-lysosome fusion, prevents the appearance of the hallmarks caused by the Spns1 deficiency, irrespective of the basal p53 state. Thus, these results provide evidence that Spns1 operates during autophagy and senescence differentially with Beclin 1 and p53.

Indexed as

AgingAnimalsApoptosis Regulatory ProteinsAutophagyBeclin-1DNA DamageDNA RepairEnzyme InhibitorsGene Knockdown TechniquesGreen Fluorescent ProteinsLysosomesMacrolidesMembrane ProteinsMitochondriaTumor Suppressor Protein p53Vacuolar Proton-Translocating ATPasesApoptosis Regulatory Proteinsbafilomycin A1Beclin-1Becn1 protein, zebrafishenhanced green fluorescent proteinEnzyme InhibitorsGreen Fluorescent ProteinsMacrolidesMembrane Proteinsspns1 protein, zebrafishtp53 protein, zebrafishTumor Suppressor Protein p53Vacuolar Proton-Translocating ATPasesZebrafish Proteins

Identifiers

PMID24967584
PMCPMC4072523
OpenAlexW1574067699

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.