Evidence map›Paper›PMID 24966940›Full record

ArticleInternational journal of clinical and experimental pathology2014

Methylation of PRDM2, PRDM5 and PRDM16 genes in lung cancer cells.

Shuang-Xiang Tan, Rui-Cheng Hu, Jing-Jing Liu, Yong-Li Tan, Wen-En Liu

Open access · greenAbstract read
In one paragraph

Article in International journal of clinical and experimental pathology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 31 citations in OpenAlex.

  1. Vitamin C Prevents Offspring DNA Methylation Changes Associated with Maternal Smoking in Pregnancy.American journal of respiratory and critical care medicine · 2017
    Trial
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  7. Review
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  10. Review
  11. PRDM16 suppresses HIF-targeted gene expression in kidney cancer.The Journal of experimental medicine · 2020
    Article
  12. Multifaceted Role of PRDM Proteins in Human Cancer.International journal of molecular sciences · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Article
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  18. Article
  19. Epigenetic silencing ofOncotarget · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Shuang-Xiang TanClinical Laboratory, Xiangya Hospital, Central South University Changsha, China.
Rui-Cheng HuHunan Province Geriatric Hospital Changsha, China.
Jing-Jing LiuHunan Province Geriatric Hospital Changsha, China.
Yong-Li TanHunan Province Geriatric Hospital Changsha, China.
Wen-En LiuClinical Laboratory, Xiangya Hospital, Central South University Changsha, China.
Hunan Mawangdui Hospital · CNCentral South University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimsTo investigate the changes of expression and methylation status of PRDM2, PRDM5, PRDM16 in lung cancer cells after treatment with demethylation agent.

methodsA549 (lung adenocarcinoma cell line), HTB-182 (lung squamous cell carcinoma cell line) and HBE (normal bronchial cell line) were treated with 5-aza-2dC. The methylation state of PRDM2, PRDM5, PRDM16 was detected by MSP. The expression of PRDM2, PRDM5, PRDM16 was detected by RT-PCR and Western blot analysis. Cell growth was detected by MTT assay.

results5-aza-2-dC reduced the methylation of PRDM2, PRDM5, PRDM16 gene in A549 and HTB-182 cells but not in HBE cells. Consistently, 5-aza-2dC increased mRNA and protein expression of PRDM2, PRDM5, PRDM16 in A549 and HTB-182 cells but not in HBE cells. Furthermore, 5-aza-2dC inhibited the growth of A549 and HTB-182 cells but not HBE cells.

conclusionsPRDM2, PRDM5, PRDM16 promoters are methylated and their expression is suppressed in lung cancer cells. Demethylation drug 5-aza-2dC could upregulate the expression of PRDM2, PRDM5, PRDM16 and suppress lung cancer cell growth. 5-aza-2dC has potential to be used for lung cancer therapy by epigenetic mechanism.

Indexed as

DNA MethylationEpigenesis, GeneticAzacitidineCell Line, TumorCell ProliferationDecitabineDNA-Binding ProteinsDNA Modification MethylasesDose-Response Relationship, DrugEnzyme InhibitorsGene Expression Regulation, NeoplasticHistone-Lysine N-MethyltransferaseHumansLung NeoplasmsNuclear ProteinsPromoter Regions, GeneticAzacitidineDecitabineDNA-Binding ProteinsDNA Modification MethylasesEnzyme InhibitorsHistone-Lysine N-MethyltransferaseNuclear ProteinsPRDM16 protein, humanPRDM2 protein, humanPRDM5 protein, humanRNA, MessengerTranscription Factorsepigeneticsgene expressionlung cancermethylationPRDM

Identifiers

PMID24966940
PMCPMC4069964
OpenAlexW2276171633

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.