Evidence map›Paper›PMID 24966050›Full record

ArticleFEMS microbiology letters2014

Environmental regulation of the long polar fimbriae 2 of enterohemorrhagic Escherichia coli O157:H7.

Margarita M Arenas-Hernández, Maricarmen Rojas-López, Abraham Medrano-López, Karen J Nuñez-Reza, José Luis Puente, Ygnacio Martínez-Laguna, Alfredo G Torres

Open access · bronzeAbstract readLetter
In one paragraph

Article in FEMS microbiology letters, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Frontiers in cellular and infection microbiology · 2020
    Article
  4. mSphere · 2019
    Article
  5. Modulation of EnterohaemorrhagicMicroorganisms · 2018
    Review
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Margarita M Arenas-HernándezPosgrado en Microbiología, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico; Licenciatura en Biomedicina, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico; Centro de Investigaciones en Ciencias Microbiológicas, Benemérita Universidad Autónoma de Puebla, Puebla, Mexico.
Maricarmen Rojas-López
Abraham Medrano-López
Karen J Nuñez-Reza
José Luis Puente
Ygnacio Martínez-Laguna
Alfredo G Torres
Benemérita Universidad Autónoma de Puebla · MXUniversidad Nacional Autónoma de México · MXThe University of Texas Medical Branch at Galveston · US

Funding

Long Polar Fimbriae of Attaching and Effacing Escherichia coliR01AI079154 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI TORRES, ALFREDO G · 2009 to 2013
$1.9M
NIAID NIH HHS AI079154NIAID NIH HHS R01 AI079154
6 · The paper itself

Abstract

The molecular mechanisms controlling expression of the long polar fimbriae 2 (Lpf2) of enterohemorrhagic Escherichia coli (EHEC) O157:H7 were evaluated. Primer extension was used to locate the lpfA2 transcriptional start site in EHEC strain EDL933 at 171 bp upstream of the lpfA2 start codon. Semi-quantitative RT-PCR demonstrated that the highest lpfA2 expression occurs between an OD600 of 1.0 and 1.2 in DMEM at pH 6.5 and 37 °C. The level of lpfA2 transcription at OD600 1.2 and pH 6.5 was four times greater than that at pH 7.2. Although lpfA2 expression was decreased under iron-depleted conditions, its expression was increased in a ferric-uptake-regulator (Fur) mutant strain. The lpfA2 transcript was 0.7 and 2 times more abundant in wt EHEC grown in DMEM pH 6.5 plus iron and MacConkey broth at 25 °C, respectively, than in DMEM at pH 6.5. The lpf2 expression in DMEM pH 6.5 plus iron and bile salts was 2.7 times more abundant than baseline conditions. Further, transcription in the EDL933∆fur was 0.6 and 0.8 times higher as compared with the wt strain grown in DMEM pH 6.5 plus iron and MacConkey broth, respectively. Electrophoretic mobility shift assays showed that purified Fur interacts with the lpf2 regulatory region, indicating that Fur repression is exerted by direct binding to the promoter region. In summary, we demonstrated that the EHEC lpf2 operon is regulated in response to temperature, pH, bile salts and iron, during the exponential phase of growth, and is controlled by Fur.

Indexed as

Bacterial ProteinsBile Acids and SaltsCulture MediaEscherichia coli O157Escherichia coli ProteinsFimbriae ProteinsGene Expression Regulation, BacterialHydrogen-Ion ConcentrationIronPromoter Regions, GeneticProtein BindingRepressor ProteinsRNA-Directed DNA PolymeraseTemperatureTranscription Initiation SiteBacterial ProteinsBile Acids and SaltsCulture MediaEscherichia coli Proteinsferric uptake regulating proteins, bacterialFimbriae ProteinsIronLpfA protein, E coliRepressor ProteinsRNA-Directed DNA Polymeraseferric-uptake-regulatorlong polar 2 fimbriaelpf2 operon

Identifiers

PMID24966050
PMCPMC4139445
OpenAlexW2065250891

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.