Evidence map›Paper›PMID 24964733›Full record

ArticleScientific reports2014

A preliminary study of the relationship between breast cancer metastasis and loss of heterozygosity by using exome sequencing.

Hongsheng Li, Bo Yang, Ke Xing, Nangui Yuan, Bo Wang, Zhenyu Chen, Weixing He, Jie Zhou

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Frontiers in genetics · 2021
    Article
  6. Article
  7. The impact of recombination on human mutation load and disease.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Hongsheng LiDepartment of Breast Surgery, the Affiliated Tumor Hospital of Guangzhou Medical University, Guangzhou 510095, China.
Bo YangThe tumor Research Institute of Guangzhou Medical University, Guangzhou 510095, China.
Ke XingSchool of Life Sciences, Sun Yat-Sen University, Guangzhou 510275, China.
Nangui YuanDepartment of Breast Surgery, the Affiliated Tumor Hospital of Guangzhou Medical University, Guangzhou 510095, China.
Bo WangDepartment of Breast Surgery, the Affiliated Tumor Hospital of Guangzhou Medical University, Guangzhou 510095, China.
Zhenyu ChenSchool of Life Sciences, Sun Yat-Sen University, Guangzhou 510275, China.
Weixing HeDepartment of Breast Surgery, the Affiliated Tumor Hospital of Guangzhou Medical University, Guangzhou 510095, China.
Jie ZhouDepartment of Breast Surgery, the Affiliated Tumor Hospital of Guangzhou Medical University, Guangzhou 510095, China.
Sun Yat-sen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We explored the feasibility of studying loss of heterozygosity (LOH) by using exome sequencing and compared the differences in genetic LOH between primary breast tumors and metastatic lesions. Exome sequencing was conducted to investigate the genetic LOH in the peripheral blood, a primary tumor, and a metastatic lesion from the same patient. LOH was observed in 30 and 48 chromosomal loci of the primary tumor and metastatic lesion, respectively. The incidence of LOH was the highest on chromosome 19, followed by chromosomes 14, 3, and 11 in the metastatic lesion. Among these 'hot' regions, LOH was observed for multiple genes of the CECAM, MMP and ZNF families. Therefore, the use of exome sequencing for studying LOH is feasible. More members of gene families appeared with LOH in 'hot' regions, suggesting that these gene families had synergistic effects in tumorigenesis.

Indexed as

Base SequenceBreast NeoplasmsChromosome MappingExomeFeasibility StudiesFemaleHumansLoss of HeterozygosityMolecular Sequence DataMultigene FamilyNeoplasm MetastasisPilot Projects

Identifiers

PMID24964733
PMCPMC5381542
OpenAlexW2031054934

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.