Evidence map›Paper›PMID 24964072›Full record

ArticlePloS one2014

Polymorphisms in CISH gene are associated with persistent hepatitis B virus infection in Han Chinese population.

Zhangyong Hu, Jinliang Yang, Yangping Wu, Guolian Xiong, Yali Wang, Jun Yang, Lan Deng

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Review
  3. Identification of mutations in porcineFrontiers in veterinary science · 2022
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Negative Regulation of Cytokine Signaling in Immunity.Cold Spring Harbor perspectives in biology · 2018
    Review
  9. Article
  10. Article
  11. [The Role of SOCS in the Development of Tumors].Zhongguo fei ai za zhi = Chinese journal of lung cancer · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zhangyong HuState Key Laboratory of Biotherapy and Cancer Center, West China Hospital, West China Medical School, Sichuan University, Chengdu, China; Department of Infection Disease, The First Affiliated Hospital of Chengdu Medical College, Chengdu, Sichuan Province, China.
Jinliang YangState Key Laboratory of Biotherapy and Cancer Center, West China Hospital, West China Medical School, Sichuan University, Chengdu, China.
Yangping WuState Key Laboratory of Biotherapy and Cancer Center, West China Hospital, West China Medical School, Sichuan University, Chengdu, China.
Guolian XiongDepartment of Infection Disease, The First Affiliated Hospital of Chengdu Medical College, Chengdu, Sichuan Province, China.
Yali WangDepartment of Infection Disease, The First Affiliated Hospital of Chengdu Medical College, Chengdu, Sichuan Province, China.
Jun YangDepartment of Infection Disease, The First Affiliated Hospital of Chengdu Medical College, Chengdu, Sichuan Province, China.
Lan DengDepartment of Infection Disease, The First Affiliated Hospital of Chengdu Medical College, Chengdu, Sichuan Province, China.
Sichuan University · CNFirst Affiliated Hospital of Chengdu Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimCytokine-inducible SRC homology 2 domain protein (CISH) is the first member of the suppressors of cytokine signaling (SOCS) protein family. An association between multiple CISH polymorphisms and susceptibility to infectious diseases has been reported. This study aimed to investigate the possible association of these single nucleotide polymorphisms (SNPs) in CISH gene with different outcomes of Hepatitis B virus (HBV) infection.

methods1019 unrelated Chinese Han subjects, including 240 persistent asymptomatic HBV carriers, 217 chronic hepatitis B patients, 137 HBV-related liver cirrhosis patients, and 425 cases of spontaneously recovered HBV as controls, were studied. Four SNPs (rs622502, rs2239751, rs414171 and rs6768300) in CISH gene were genotyped with the snapshot technique. Transcriptional activity of the CISH promoter was assayed in vitro using the dual-luciferase reporter assay system.

resultsAt position rs414171, A allele and AA genotype frequencies were significantly higher in the HBV-resolved group as compared to the persistent HBV infection group. At position rs2239751, TT genotype was further observed in the HBV-resolved group. Using asymptomatic HBV carriers as controls, our results indicated that the rs414171 and rs2239751 polymorphisms were unrelated to HBV progression. The other two SNPs (rs622502 and rs6768300) showed no association with persistent HBV infection. Haplotype analysis revealed that the GGCA haplotype was associated with spontaneous clearance of HBV in this population. Moreover, luciferase activity was significantly higher in the PGL3-Basic-rs414171T construct as compared to the PGL3-Basic-rs414171A construct (p<0.001).

conclusionTwo SNPs (rs414171 and rs2239751) in the CISH gene were associated with persistent HBV infection in Han Chinese population, but not with HBV progression.

Indexed as

Polymorphism, Single NucleotideAdultAsian PeopleEthnicityFemaleGenetic Predisposition to DiseaseHaplotypesHepatitis B, ChronicHumansMaleSuppressor of Cytokine Signaling ProteinsTranscription, GeneticSuppressor of Cytokine Signaling Proteins

Identifiers

PMID24964072
PMCPMC4071005
OpenAlexW2004586152

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.