Evidence map›Paper›PMID 24963879›Full record

ArticleGene expression patterns : GEP2014

Protein degradation machinery is present broadly during early development in the sea urchin.

Vanesa Zazueta-Novoa, Gary M Wessel

Open access · greenAbstract read
In one paragraph

Article in Gene expression patterns : GEP, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 90% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Vanesa Zazueta-NovoaDepartment of Molecular and Cellular Biology & Biochemistry, Brown University, Providence, RI 02912, USA.
Gary M WesselDepartment of Molecular and Cellular Biology & Biochemistry, Brown University, Providence, RI 02912, USA. Electronic address: rhet@brown.edu.
Brown University · US

Funding

Post-translational Regulation of Germline DeterminantsR01HD028152 · NICHD · BROWN UNIVERSITY · PI WESSEL, GARY M · 1997 to 2016
$3.9M
Shared High-throughput DNA sequencer for the Brown University CommunityS10RR027634 · NCRR · BROWN UNIVERSITY · PI WESSEL, GARY M · 2010 to 2010
$500k
NCRR NIH HHS S10 RR027634NICHD NIH HHS 2R01HD028152NICHD NIH HHS R01 HD028152
6 · The paper itself

Abstract

Ubiquitin-dependent proteosome-mediated proteolysis is an important pathway of degradation that controls the timed destruction of cellular proteins in all tissues. All intracellular proteins and many extracellular proteins are continually being hydrolyzed to their constituent amino acids as a result of their recognition by E3 ligases for specific targeting of ubiquitination. Gustavus is a member of an ECS-type E3 ligase which interacts with Vasa, a DEAD-box RNA helicase, to regulate its localization during sea urchin embryonic development, and Gustavus mRNA accumulation is highly localized and dynamic during development. We tested if the core complex for Gustavus function was present in the embryo and if other SOCS box proteins also had restricted expression profiles that would inform future research. Expression patterns of the key members of the proteasomal function, such as the E3 core complex which interacts with Gustavus, and other E3-SOCS box proteins, are widely spread and dynamic in early development of the embryo suggesting broad core complex availability in the proteasome degradation pathway and temporal/spatial enrichments of various E3 ligase dependent targeting mechanisms.

Indexed as

Gene Expression ProfilingGene Expression Regulation, DevelopmentalProteolysisAnimalsDrosophila melanogasterHumansIn Situ HybridizationMaleMiceProteasome Endopeptidase ComplexProtein BindingProteinsRNA, MessengerSea UrchinsTime FactorsUbiquitinationProteasome Endopeptidase ComplexProteinsRNA, MessengerUbiquitin-Protein LigasesE3 ligasesProteasomeProteolysisUbiquitination

Identifiers

PMID24963879
PMCPMC4125525
OpenAlexW2083318053

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.