Evidence map›Paper›PMID 24961799›Full record

ArticleDevelopment (Cambridge, England)2014

Gene expression profiling identifies the zinc-finger protein Charlatan as a regulator of intestinal stem cells in Drosophila.

Alla Amcheslavsky, Yingchao Nie, Qi Li, Feng He, Leo Tsuda, Michele Markstein, Y Tony Ip

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Alla AmcheslavskyProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Yingchao NieProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Qi LiProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Feng HeDepartment of Microbiology and Physiological Systems, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Leo TsudaAnimal Models of Aging, National Center for Geriatrics and Gerontology, Obu, Aichi 474-8511, Japan.
Michele MarksteinDepartment of Biology, University of Massachusetts, Amherst, MA 01003, USA.
Y Tony IpProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, MA 01605, USA tony.ip@umassmed.edu.
University of Massachusetts Chan Medical School · USNational Center for Geriatrics and Gerontology · JPUniversity of Massachusetts Amherst · US

Funding

PILOT AND FEASIBILITY PROGRAMP30DK032520 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI CZECH, MICHAEL P · 1986 to 2010
$14.6M
University of Massachusetts Center for Clinical and Translational ScienceUL1TR000161 · NCATS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LUZURIAGA, KATHERINE F · 2012 to 2015
$11.0M
Genetic analysis of damage-induced intestinal stem cell division in DrosophilaR01DK083450 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI IP, Y. TONY · 2010 to 2024
$4.7M
NCATS NIH HHS UL1 TR000161NCATS NIH HHS UL1TR000161NIDDK NIH HHS DK83450NIDDK NIH HHS P30 DK032520NIDDK NIH HHS R01 DK083450
6 · The paper itself

Abstract

Intestinal stem cells (ISCs) in the adult Drosophila midgut can respond to tissue damage and support repair. We used genetic manipulation to increase the number of ISC-like cells in the adult midgut and performed gene expression profiling to identify potential ISC regulators. A detailed analysis of one of these potential regulators, the zinc-finger protein Charlatan, was carried out. MARCM clonal analysis and RNAi in precursor cells showed that loss of Chn function caused severe ISC division defects, including loss of EdU incorporation, phosphorylated histone 3 staining and expression of the mitotic protein Cdc2. Loss of Charlatan also led to a much reduced histone acetylation staining in precursor cells. Both the histone acetylation and ISC division defects could be rescued by the simultaneous decrease of the Histone Deacetylase 2. The overexpression of Charlatan blocked differentiation reversibly, but loss of Charlatan did not lead to automatic differentiation. The results together suggest that Charlatan does not simply act as an anti-differentiation factor but instead functions to maintain a chromatin structure that is compatible with stem cell properties, including proliferation.

Indexed as

AnimalsCell DifferentiationDrosophilaDrosophila ProteinsGene Expression ProfilingIntestinesMicroarray AnalysisMicroscopy, FluorescenceRNA InterferenceStem CellsTranscription Factorschn protein, DrosophilaDrosophila ProteinsTranscription FactorsCharlatanChromatinDrosophilaIntestineStem cellsZinc-finger protein

Identifiers

PMID24961799
PMCPMC4067959
OpenAlexW2168584240

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.