ArticlePloS one2014
Comparison of deep-water viromes from the atlantic ocean and the mediterranean sea.
Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
What it found
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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
22 citing papers in PubMed.
- Engineering bacteriophages through deep mining of metagenomic motifs.Science advances · 2025Article
- The compact genome of the sponge Oopsacas minuta (Hexactinellida) is lacking key metazoan core genes.BMC biology · 2023Article
- Unraveling anticancer potential of a novel serine protease inhibitor from marine yeast Candida parapsilosis ABS1 against colorectal and breast cancer cells.World journal of microbiology & biotechnology · 2023Article
- Article
- Viral Characteristics of the Warm Atlantic and Cold Arctic Water Masses in the Nordic Seas.Applied and environmental microbiology · 2021Article
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- Microbial Diversity and Phage-Host Interactions in the Georgian Coastal Area of the Black Sea Revealed by Whole Genome Metagenomic Sequencing.Marine drugs · 2020Article
- Bacteriophages in Natural and Artificial Environments.Pathogens (Basel, Switzerland) · 2019Review
- Viral population analysis of the taiga tick, Ixodes persulcatus, by using Batch Learning Self-Organizing Maps and BLAST search.The Journal of veterinary medical science · 2019Article
- Metagenomic Analysis of the Diversity of DNA Viruses in the Surface and Deep Sea of the South China Sea.Frontiers in microbiology · 2019Article
- Droplet Digital PCR for Estimating Absolute Abundances of Widespread Pelagibacter Viruses.Frontiers in microbiology · 2019Article
- The Geographic Structure of Viruses in the Cuatro Ciénegas Basin, a Unique Oasis in Northern Mexico, Reveals a Highly Diverse Population on a Small Geographic Scale.Applied and environmental microbiology · 2018Article
- Viral Diversity and Its Relationship With Environmental Factors at the Surface and Deep Sea of Prydz Bay, Antarctica.Frontiers in microbiology · 2018Article
- Deep-Sea Hydrothermal Vent Viruses Compensate for Microbial Metabolism in Virus-Host Interactions.mBio · 2017Article
- Marine viruses discovered via metagenomics shed light on viral strategies throughout the oceans.Nature communications · 2017Article
- Insights of Phage-Host Interaction in Hypersaline Ecosystem through Metagenomics Analyses.Frontiers in microbiology · 2017Article
- Aquarium Viromes: Viromes of Human-Managed Aquatic Systems.Frontiers in microbiology · 2017Article
- Article
- Metagenomic Analysis of Virioplankton of the Subtropical Jiulong River Estuary, China.Viruses · 2016Article
- Article
Corrections and comments
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Authors and funding
5 authors.
Funding
Abstract
The aim of this study was to compare the composition of two deep-sea viral communities obtained from the Romanche Fracture Zone in the Atlantic Ocean (collected at 5200 m depth) and the southwest Mediterranean Sea (from 2400 m depth) using a pyro-sequencing approach. The results are based on 18.7% and 6.9% of the sequences obtained from the Atlantic Ocean and the Mediterranean Sea, respectively, with hits to genomes in the non-redundant viral RefSeq database. The identifiable richness and relative abundance in both viromes were dominated by archaeal and bacterial viruses accounting for 92.3% of the relative abundance in the Atlantic Ocean and for 83.6% in the Mediterranean Sea. Despite characteristic differences in hydrographic features between the sampling sites in the Atlantic Ocean and the Mediterranean Sea, 440 virus genomes were found in both viromes. An additional 431 virus genomes were identified in the Atlantic Ocean and 75 virus genomes were only found in the Mediterranean Sea. The results indicate that the rather contrasting deep-sea environments of the Atlantic Ocean and the Mediterranean Sea share a common core set of virus types constituting the majority of both virus communities in terms of relative abundance (Atlantic Ocean: 81.4%; Mediterranean Sea: 88.7%).
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Registered trials
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