Evidence map›Paper›PMID 24959316›Full record

ArticleInternational journal of molecular epidemiology and genetics2014

Biomarkers measured in buccal and blood leukocyte DNA as proxies for colon tissue global methylation.

Janet E Ashbury, Sherryl A Taylor, M Yat Tse, Stephen C Pang, Jacob A Louw, Stephen J Vanner, Will D King

Open access · greenAbstract read
In one paragraph

Article in International journal of molecular epidemiology and genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Janet E AshburyDepartment of Public Health Sciences, Queen's University Kingston, ON, Canada.
Sherryl A TaylorDepartment of Medical Genetics, University of Alberta Edmonton AB, Canada ; Molecular Diagnostics, Genetic Laboratory Services, Alberta Health Services Edmonton, AB, Canada.
M Yat TseDepartment of Biomedical and Molecular Sciences, Queen's University Kingston, ON, Canada.
Stephen C PangDepartment of Biomedical and Molecular Sciences, Queen's University Kingston, ON, Canada.
Jacob A LouwDepartment of Medicine, Division of Gastroenterology, Hotel Dieu Hospital/Queen's University Kingston, ON, Canada.
Stephen J VannerDepartment of Medicine, Division of Gastroenterology, Hotel Dieu Hospital/Queen's University Kingston, ON, Canada ; Gastrointestinal Diseases Research Unit (GIDRU), Queen's University Kingston, ON, Canada.
Will D KingDepartment of Public Health Sciences, Queen's University Kingston, ON, Canada.
Queen's University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

There is increasing interest in clarifying the role of global DNA methylation levels in colorectal cancer (CRC) etiology. Most commonly, in epidemiologic studies, methylation is measured in DNA derived from blood leukocytes as a proxy measure of methylation changes in colon tissue. However, little is known about the correlations between global methylation levels in DNA derived from colon tissue and more accessible tissues such as blood or buccal cells. This cross-sectional study utilized DNA samples from a screening colonoscopy population to determine to what extent LINE-1 methylation levels (as a proxy for genome-wide methylation) in non-target tissue (e.g., blood, buccal cells) reflected methylation patterns of colon mucosal tissue directly at risk of developing CRC. The strongest Pearson correlation was observed between LINE-1 methylation levels in buccal and blood leukocyte DNA (r = 0.50; N = 67), with weaker correlations for comparisons between blood and colon tissue (r = 0.36; N = 280), and buccal and colon tissue (r = 0.27; N = 72). These findings of weak/moderate correlations have important implications for interpreting and planning future investigations of epigenetic markers and CRC risk.

Indexed as

colorectal adenomacolorectal cancercorrelationglobal DNA methylationLINE-1 DNA methylation

Identifiers

PMID24959316
PMCPMC4065400
OpenAlexW2136134826

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.