Evidence map›Paper›PMID 24958895›Full record

ArticleJournal of experimental botany2014

Transcriptional responses indicate maintenance of photosynthetic proteins as key to the exceptional chilling tolerance of C4 photosynthesis in Miscanthus × giganteus.

Ashley K Spence, Jay Boddu, Dafu Wang, Brandon James, Kankshita Swaminathan, Stephen P Moose, Stephen P Long

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Ashley K SpenceProctor and Gamble, 8700 South Mason-Montgomery Road Mason, OH 45040, USA.
Jay BodduDepartment of Crop Sciences, University of Illinois, 389 Edward R. Madigan Laboratory, 1201W Gregory Drive, Urbana, IL 61801, USA.
Dafu WangMonsanto Company, Chesterfield Village Research Center, 700 Chesterfield Parkway North, Chesterfield, MO 63017, USA.
Brandon JamesDepartment of Crop Sciences, University of Illinois, 389 Edward R. Madigan Laboratory, 1201W Gregory Drive, Urbana, IL 61801, USA.
Kankshita SwaminathanEnergy Biosciences Institute, University of Illinois, 1200 Institute for Genomic Biology, 1206W. Gregory Drive, Urbana, IL 61801, USA.
Stephen P MooseDepartment of Crop Sciences, University of Illinois, 389 Edward R. Madigan Laboratory, 1201W Gregory Drive, Urbana, IL 61801, USA.
Stephen P LongDepartment of Crop Sciences, University of Illinois, 389 Edward R. Madigan Laboratory, 1201W Gregory Drive, Urbana, IL 61801, USA slong@illinois.edu.
University of Illinois Urbana-Champaign · USMonsanto (United States) · USProcter & Gamble (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Miscanthus × giganteus is exceptional among C4 plants in its ability to acclimate to chilling (≤14 °C) and maintain a high photosynthetic capacity, in sharp contrast to maize, leading to very high productivity even in cool temperate climates. To identify the mechanisms that underlie this acclimation, RNA was isolated from M × giganteus leaves in chilling and nonchilling conditions and hybridized to microarrays developed for its close relative Zea mays. Among 21 000 array probes that yielded robust signals, 723 showed significant expression change under chilling. Approximately half of these were for annotated genes. Thirty genes associated with chloroplast membrane function were all upregulated. Increases in transcripts for the lhcb5 (chlorophyll a/b-binding protein CP26), ndhF (NADH dehydrogenase F, chloroplast), atpA (ATP synthase alpha subunit), psbA (D1), petA (cytochrome f), and lhcb4 (chlorophyll a/b-binding protein CP29), relative to housekeeping genes in M. × giganteus, were confirmed by quantitative reverse-transcription PCR. In contrast, psbo1, lhcb5, psbA, and lhcb4 were all significantly decreased in Z. mays after 14 days of chilling. Western blot analysis of the D1 protein and LHCII type II chlorophyll a/b-binding protein also showed significant increases in M. × giganteus during chilling and significant decreases in Z. mays. Compared to other C4 species, M. × giganteus grown in chilling conditions appears to counteract the loss of photosynthetic proteins and proteins protecting photosystem II typically observed in other species by increasing mRNA levels for their synthesis.

Indexed as

Adaptation, PhysiologicalPhotosynthesisCarbon DioxideChlorophyll Binding ProteinsCold TemperatureGene Expression ProfilingGene Expression Regulation, PlantLightModels, BiologicalOligonucleotide Array Sequence AnalysisPhotosystem II Protein ComplexPlant LeavesPoaceaeRNA, PlantZea maysCarbon DioxideChlorophyll Binding ProteinsPhotosystem II Protein ComplexRNA, PlantC4 photosynthesischillingchlorophyll a/b-binding proteincoldD1 proteinLHCIIlow temperaturemaizeMiscanthustranscription.

Identifiers

PMID24958895
PMCPMC4085969
OpenAlexW2123352257

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.