Evidence map›Paper›PMID 24958855›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Direct observation of electrogenic NH4(+) transport in ammonium transport (Amt) proteins.

Tobias Wacker, Juan J Garcia-Celma, Philipp Lewe, Susana L A Andrade

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Electrocatalytic nitrate reduction using iron single atoms for sustainable ammonium supplies to increase rice yield.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Microbially Induced Calcium Carbonate Precipitation byApplied and environmental microbiology · 2023
    Review
  12. Article
  13. Expression and Functional Analysis ofAnimals : an open access journal from MDPI · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. The CopA2-Type PFrontiers in microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Tobias WackerInstitute for Biochemistry, Albert-Ludwigs University Freiburg, 79104 Freiburg, Germany;
Juan J Garcia-CelmaDepartment of Biochemistry, University of Zürich, 8057 Zürich, Switzerland;Institute of Complex Systems-Cellular Biophysics Research Center Jülich, 52428 Jülich, Germany; and.
Philipp LeweInstitute for Biochemistry, Albert-Ludwigs University Freiburg, 79104 Freiburg, Germany;
Susana L A AndradeInstitute for Biochemistry, Albert-Ludwigs University Freiburg, 79104 Freiburg, Germany;BIOSS Centre for Biological Signalling Studies, 79104 Freiburg, Germany andrade@bio.chemie.uni-freiburg.de.
University of Freiburg · DEUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ammonium transport (Amt) proteins form a ubiquitous family of integral membrane proteins that specifically shuttle ammonium across membranes. In prokaryotes, archaea, and plants, Amts are used as environmental NH4(+) scavengers for uptake and assimilation of nitrogen. In the eukaryotic homologs, the Rhesus proteins, NH4(+)/NH3 transport is used instead in acid-base and pH homeostasis in kidney or NH4(+)/NH3 (and eventually CO2) detoxification in erythrocytes. Crystal structures and variant proteins are available, but the inherent challenges associated with the unambiguous identification of substrate and monitoring of transport events severely inhibit further progress in the field. Here we report a reliable in vitro assay that allows us to quantify the electrogenic capacity of Amt proteins. Using solid-supported membrane (SSM)-based electrophysiology, we have investigated the three Amt orthologs from the euryarchaeon Archaeoglobus fulgidus. Af-Amt1 and Af-Amt3 are electrogenic and transport the ammonium and methylammonium cation with high specificity. Transport is pH-dependent, with a steep decline at pH values of ∼5.0. Despite significant sequence homologies, functional differences between the three proteins became apparent. SSM electrophysiology provides a long-sought-after functional assay for the ubiquitous ammonium transporters.

Indexed as

Ammonium CompoundsArchaeoglobus fulgidusCarrier ProteinsHydrogen-Ion ConcentrationIon TransportAmmonium CompoundsCarrier Proteinsammonium transport proteinsAmt/Rh familycation transport

Identifiers

PMID24958855
PMCPMC4103351
OpenAlexW2079120158

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.