Evidence map›Paper›PMID 24957541›Full record

ArticleThe American journal of tropical medicine and hygiene2014

Phylogeography of Rickettsia rickettsii genotypes associated with fatal Rocky Mountain spotted fever.

Christopher D Paddock, Amy M Denison, R Ryan Lash, Lindy Liu, Brigid C Bollweg, F Scott Dahlgren, Cristina T Kanamura, Rodrigo N Angerami, Fabiana C Pereira dos Santos, Roosecelis Brasil Martines and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The American journal of tropical medicine and hygiene, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 43 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Christopher D PaddockInfectious Diseases Pathology Branch and Rickettsial Zoonoses Branch, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia; Núcleo de Anatomica Patológia, Centro de Patologia do Instituto Adolfo Lutz, São Paulo, Brazil; Departamento de Vigilância em Saúde, Secretaria Municipal de Saúde de Campinas, São Paulo, Brazil cdp9@cdc.gov.
Amy M DenisonInfectious Diseases Pathology Branch and Rickettsial Zoonoses Branch, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia; Núcleo de Anatomica Patológia, Centro de Patologia do Instituto Adolfo Lutz, São Paulo, Brazil; Departamento de Vigilância em Saúde, Secretaria Municipal de Saúde de Campinas, São Paulo, Brazil.
R Ryan LashInfectious Diseases Pathology Branch and Rickettsial Zoonoses Branch, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia; Núcleo de Anatomica Patológia, Centro de Patologia do Instituto Adolfo Lutz, São Paulo, Brazil; Departamento de Vigilância em Saúde, Secretaria Municipal de Saúde de Campinas, São Paulo, Brazil.
Lindy LiuInfectious Diseases Pathology Branch and Rickettsial Zoonoses Branch, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia; Núcleo de Anatomica Patológia, Centro de Patologia do Instituto Adolfo Lutz, São Paulo, Brazil; Departamento de Vigilância em Saúde, Secretaria Municipal de Saúde de Campinas, São Paulo, Brazil.
Brigid C BollwegInfectious Diseases Pathology Branch and Rickettsial Zoonoses Branch, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia; Núcleo de Anatomica Patológia, Centro de Patologia do Instituto Adolfo Lutz, São Paulo, Brazil; Departamento de Vigilância em Saúde, Secretaria Municipal de Saúde de Campinas, São Paulo, Brazil.
F Scott DahlgrenInfectious Diseases Pathology Branch and Rickettsial Zoonoses Branch, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia; Núcleo de Anatomica Patológia, Centro de Patologia do Instituto Adolfo Lutz, São Paulo, Brazil; Departamento de Vigilância em Saúde, Secretaria Municipal de Saúde de Campinas, São Paulo, Brazil.
Cristina T KanamuraInfectious Diseases Pathology Branch and Rickettsial Zoonoses Branch, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia; Núcleo de Anatomica Patológia, Centro de Patologia do Instituto Adolfo Lutz, São Paulo, Brazil; Departamento de Vigilância em Saúde, Secretaria Municipal de Saúde de Campinas, São Paulo, Brazil.
Rodrigo N AngeramiInfectious Diseases Pathology Branch and Rickettsial Zoonoses Branch, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia; Núcleo de Anatomica Patológia, Centro de Patologia do Instituto Adolfo Lutz, São Paulo, Brazil; Departamento de Vigilância em Saúde, Secretaria Municipal de Saúde de Campinas, São Paulo, Brazil.
Fabiana C Pereira dos SantosInfectious Diseases Pathology Branch and Rickettsial Zoonoses Branch, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia; Núcleo de Anatomica Patológia, Centro de Patologia do Instituto Adolfo Lutz, São Paulo, Brazil; Departamento de Vigilância em Saúde, Secretaria Municipal de Saúde de Campinas, São Paulo, Brazil.
Roosecelis Brasil MartinesInfectious Diseases Pathology Branch and Rickettsial Zoonoses Branch, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia; Núcleo de Anatomica Patológia, Centro de Patologia do Instituto Adolfo Lutz, São Paulo, Brazil; Departamento de Vigilância em Saúde, Secretaria Municipal de Saúde de Campinas, São Paulo, Brazil.
Sandor E KarpathyInfectious Diseases Pathology Branch and Rickettsial Zoonoses Branch, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia; Núcleo de Anatomica Patológia, Centro de Patologia do Instituto Adolfo Lutz, São Paulo, Brazil; Departamento de Vigilância em Saúde, Secretaria Municipal de Saúde de Campinas, São Paulo, Brazil.
Instituto Adolfo Lutz · BRSecretaria Municipal de Saúde · BRCenters for Disease Control and Prevention · USNational Center for Emerging and Zoonotic Infectious Diseases · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rocky Mountain spotted fever (RMSF), a tick-borne zoonosis caused by Rickettsia rickettsii, is among the deadliest of all infectious diseases. To identify the distribution of various genotypes of R. rickettsii associated with fatal RMSF, we applied molecular typing methods to samples of DNA extracted from formalin-fixed, paraffin-embedded tissue specimens obtained at autopsy from 103 case-patients from seven countries who died of RMSF. Complete sequences of one or more intergenic regions were amplified from tissues of 30 (29%) case-patients and revealed a distribution of genotypes consisting of four distinct clades, including the Hlp clade, regarded previously as a non-pathogenic strain of R. rickettsii. Distinct phylogeographic patterns were identified when composite case-patient and reference strain data were mapped to the state and country of origin. The phylogeography of R. rickettsii is likely determined by ecological and environmental factors that exist independently of the distribution of a particular tick vector.

Indexed as

AdolescentAdultAgedAmericasAnimalsChildChild, PreschoolDNA, BacterialDNA, IntergenicFemaleGenotypeHumansInfantMaleMiddle AgedMolecular TypingDNA, BacterialDNA, Intergenic

Identifiers

PMID24957541
PMCPMC4155566
OpenAlexW2333600736

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.