Evidence map›Paper›PMID 24957502›Full record

ArticleProteomics. Clinical applications2014

Lysine ubiquitination and acetylation of human cardiac 20S proteasomes.

Nobel Zong, Peipei Ping, Edward Lau, Howard Jh Choi, Dominic Cm Ng, David Meyer, Caiyun Fang, Haomin Li, Ding Wang, Ivette M Zelaya and 2 more

Open access · greenAbstract read
In one paragraph

Article in Proteomics. Clinical applications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Covalent inhibition ofiScience · 2025
    Article
  2. Article
  3. Review
  4. Article
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  7. Proteomics Research in Cardiovascular Medicine and Biomarker Discovery.Journal of the American College of Cardiology · 2016
    Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Nobel Zong *The NHLBI Proteomics Center at UCLA, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Peipei Ping *The NHLBI Proteomics Center at UCLA, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Edward LauThe NHLBI Proteomics Center at UCLA, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Howard Jh ChoiThe NHLBI Proteomics Center at UCLA, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Dominic Cm NgThe NHLBI Proteomics Center at UCLA, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
David MeyerThe NHLBI Proteomics Center at UCLA, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Caiyun FangThe NHLBI Proteomics Center at UCLA, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Haomin LiThe NHLBI Proteomics Center at UCLA, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Ding WangThe NHLBI Proteomics Center at UCLA, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Ivette M ZelayaThe NHLBI Proteomics Center at UCLA, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
John R YatesDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, CA, USA.
Maggie Py LamThe NHLBI Proteomics Center at UCLA, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Digital Proteomics (United States) · USUniversity of California, Los Angeles · USScripps Research Institute · US

Funding

PKC epsilon and Src PTK Signaling in PreconditioningR37HL063901 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PING, PEIPEI · 2010 to 2016
$2.7M
NHLBI NIH HHS HHSN268201000035CNHLBI NIH HHS HL-R37-63901NHLBI NIH HHS R37 HL063901
6 · The paper itself

Abstract

purposeAltered proteasome functions are associated with multiple cardiomyopathies. While the proteasome targets polyubiquitinated proteins for destruction, it itself is modifiable by ubiquitination. We aim to identify the exact ubiquitination sites on cardiac proteasomes and examine whether they are also subject to acetylations. EXPERIMENTAL

designAssembled cardiac 20S proteasome complexes were purified from five human hearts with ischemic cardiomyopathy, then analyzed by high-resolution MS to identify ubiquitination and acetylation sites. We developed a library search strategy that may be used to complement database search in identifying PTM in different samples.

resultsWe identified 63 ubiquitinated lysines from intact human cardiac 20S proteasomes. In parallel, 65 acetylated residues were also discovered, 39 of which shared with ubiquitination sites. CONCLUSION AND CLINICAL RELEVANCE: This is the most comprehensive characterization of cardiac proteasome ubiquitination to date. There are significant overlaps between the discovered ubiquitination and acetylation sites, permitting potential crosstalk in regulating proteasome functions. The information presented here will aid future therapeutic strategies aimed at regulating the functions of cardiac proteasomes.

Indexed as

UbiquitinationAcetylationAmino Acid SequenceHumansLysineModels, MolecularMolecular Sequence DataMyocardiumProteasome Endopeptidase ComplexProtein ConformationLysineProteasome Endopeptidase Complex20S proteasomeAcetylationPTMSpectral libraryUbiquitination

Identifiers

PMID24957502
PMCPMC5094860
OpenAlexW2074734213

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.