Evidence map›Paper›PMID 24951592›Full record

ArticleThe Journal of biological chemistry2014

Replication intermediates of the linear mitochondrial DNA of Candida parapsilosis suggest a common recombination based mechanism for yeast mitochondria.

Joachim M Gerhold, Tiina Sedman, Katarina Visacka, Judita Slezakova, Lubomir Tomaska, Jozef Nosek, Juhan Sedman

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  9. Review
  10. Mitochondrial DNA replication: a PrimPol perspective.Biochemical Society transactions · 2017
    Review
  11. Article
  12. Organization and dynamics of yeast mitochondrial nucleoids.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2017
    Review
  13. Article
  14. Article
  15. Article
  16. Article
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  18. Article
  19. Integrity of the yeast mitochondrial genome, but not its distribution and inheritance, relies on mitochondrial fission and fusion.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Joachim M GerholdDepartment of Biochemistry, Institute of Molecular and Cell Biology, University of Tartu, Riia 23c, 51014 Tartu, Estonia and. Electronic address: gerhold@ut.ee.
Tiina SedmanDepartment of Biochemistry, Institute of Molecular and Cell Biology, University of Tartu, Riia 23c, 51014 Tartu, Estonia and.
Katarina VisackaDepartment of Genetics, Faculty of Natural Sciences, Comenius University, Mlynská dolina B-1, and.
Judita SlezakovaDepartment of Genetics, Faculty of Natural Sciences, Comenius University, Mlynská dolina B-1, and.
Lubomir TomaskaDepartment of Genetics, Faculty of Natural Sciences, Comenius University, Mlynská dolina B-1, and.
Jozef NosekDepartment of Biochemistry, Faculty of Natural Sciences, Comenius University, Mlynská dolina CH-1, 842 15 Bratislava, Slovak Republic.
Juhan SedmanDepartment of Biochemistry, Institute of Molecular and Cell Biology, University of Tartu, Riia 23c, 51014 Tartu, Estonia and.
Comenius University Bratislava · SKUniversity of Tartu · EE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Variation in the topology of mitochondrial DNA (mtDNA) in eukaryotes evokes the question if differently structured DNAs are replicated by a common mechanism. RNA-primed DNA synthesis has been established as a mechanism for replicating the circular animal/mammalian mtDNA. In yeasts, circular mtDNA molecules were assumed to be templates for rolling circle DNA-replication. We recently showed that in Candida albicans, which has circular mapping mtDNA, recombination driven replication is a major mechanism for replicating a complex branched mtDNA network. Careful analyses of C. albicans-mtDNA did not reveal detectable amounts of circular DNA molecules. In the present study we addressed the question of how the unit sized linear mtDNA of Candida parapsilosis terminating at both ends with arrays of tandem repeats (mitochondrial telomeres) is replicated. Originally, we expected to find replication intermediates diagnostic of canonical bi-directional replication initiation at the centrally located bi-directional promoter region. However, we found that the linear mtDNA of Candida parapsilosis also employs recombination for replication initiation. The most striking findings were that the mitochondrial telomeres appear to be hot spots for recombination driven replication, and that stable RNA:DNA hybrids, with a potential role in mtDNA replication, are also present in the mtDNA preparations.

Indexed as

CandidaDNA, FungalDNA, MitochondrialDNA ReplicationMitochondriaRecombination, GeneticTelomereDNA, FungalDNA, MitochondrialCandida ParapsilosisDNA RecombinationDNA ReplicationDNA TopologyMitochondriaMitochondrial DNA (mtDNA)Yeast

Identifiers

PMID24951592
PMCPMC4132773
OpenAlexW2053666250

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.