Evidence map›Paper›PMID 24950598›Full record

ArticleBMC evolutionary biology2014

Multi-locus phylogeny of lethal amanitas: implications for species diversity and historical biogeography.

Qing Cai, Rodham E Tulloss, Li P Tang, Bau Tolgor, Ping Zhang, Zuo H Chen, Zhu L Yang

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 140 citations in OpenAlex.

  1. Article
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  8. Phylogeny and Taxonomy of theJournal of fungi (Basel, Switzerland) · 2024
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  9. New Contributions on Species Diversity of GenusJournal of fungi (Basel, Switzerland) · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Identification of lethal species inFrontiers in microbiology · 2024
    Article
  14. Mushrooms Adapted to Seawater: Two New Species ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  15. Species Diversity ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  16. Article
  17. Taxonomic Novelties and New Records ofJournal of fungi (Basel, Switzerland) · 2023
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  18. Survey of EdibleJournal of fungi (Basel, Switzerland) · 2023
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  19. Diversity and taxonomy of the genusFrontiers in plant science · 2023
    Article
  20. Biology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Qing Cai
Rodham E Tulloss
Li P Tang
Bau Tolgor
Ping Zhang
Zuo H Chen
Zhu L YangKey Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan 650201, China. fungi@mail.kib.ac.cn.
Chinese Academy of Sciences · CNHunan Normal University · CNJilin Agricultural University · CNKunming Medical University · CNTheodore Roosevelt High School · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLethal amanitas (Amanita section Phalloideae) are a group of wild, fatal mushrooms causing many poisoning cases worldwide. However, the diversity and evolutionary history of these lethal mushrooms remain poorly known due to the limited sampling and insufficient gene fragments employed for phylogenetic analyses. In this study, five gene loci (nrLSU, ITS, rpb2, ef1-α and β-tubulin) with a widely geographic sampling from East and South Asia, Europe, North and Central America, South Africa and Australia were analysed with maximum-likelihood, maximum-parsimony and Bayesian inference methods. Biochemical analyses were also conducted with intention to detect amatoxins and phalloidin in 14 representative samples.

resultLethal amanitas were robustly supported to be a monophyletic group after excluding five species that were provisionally defined as lethal amanitas based on morphological studies. In lethal amanitas, 28 phylogenetic species were recognised by integrating molecular phylogenetic analyses with morphological studies, and 14 of them represented putatively new species. The biochemical analyses indicated a single origin of cyclic peptide toxins (amatoxins and phalloidin) within Amanita and suggested that this kind of toxins seemed to be a synapomorphy of lethal amanitas. Molecular dating through BEAST and biogeographic analyses with LAGRANGE and RASP indicated that lethal amanitas most likely originated in the Palaeotropics with the present crown group dated around 64.92 Mya in the early Paleocene, and the East Asia-eastern North America or Eurasia-North America-Central America disjunct distribution patterns were primarily established during the middle Oligocene to Miocene.

conclusionThe cryptic diversity found in this study indicates that the species diversity of lethal amanitas is strongly underestimated under the current taxonomy. The intercontinental sister species or sister groups relationships among East Asia and eastern North America or Eurasia-North America-Central America within lethal amanitas are best explained by the diversification model of Palaeotropical origin, dispersal via the Bering Land Bridge, followed by regional vicariance speciation resulting from climate change during the middle Oligocene to the present. These findings indicate the importance of both dispersal and vicariance in shaping the intercontinental distributions of these ectomycorrhizal fungi.

Indexed as

AmanitaBayes TheoremBiological EvolutionDNA, FungalPhylogenyDNA, Fungal

Identifiers

PMID24950598
PMCPMC4094918
OpenAlexW2005980238

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.