Evidence map›Paper›PMID 24950373›Full record

ArticleJournal of the American Chemical Society2014

The diagnostic vibrational signature of pentacoordination in heme carbonyls.

Douglas P Linder, Nathan J Silvernail, Alexander Barabanschikov, Jiyong Zhao, E Ercan Alp, Wolfgang Sturhahn, J Timothy Sage, W Robert Scheidt, Kenton R Rodgers

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Corynebacterium diphtheriae HmuT: dissecting the roles of conserved residues in heme pocket stabilization.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2016
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Comprehensive Fe-ligand vibration identification in {FeNO}6 hemes.Journal of the American Chemical Society · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Douglas P LinderDepartment of Chemistry and Biochemistry, North Dakota State University , Fargo, North Dakota 58105, United States.
Nathan J Silvernail
Alexander Barabanschikov
Jiyong Zhao
E Ercan Alp
Wolfgang Sturhahn
J Timothy Sage
W Robert Scheidt
Kenton R Rodgers

Funding

X-RAY &CHEMICAL STUDIES OF METALLOPORPHYRINSR01GM038401 · NIGMS · UNIVERSITY OF NOTRE DAME · PI SCHEIDT, W. ROBERT · 1987 to 2010
$3.3M
Study of heme uptake and transport proteins from P. aerugenosa and S. dysenteriaeR15AI072719 · NIAID · NORTH DAKOTA STATE UNIVERSITY · PI RODGERS, KENTON · 2007 to 2011
$707k
NIAID NIH HHS AI072719NIAID NIH HHS R15 AI072719NIGMS NIH HHS GM38401NIGMS NIH HHS R01 GM038401
6 · The paper itself

Abstract

Heme-carbonyl complexes are widely exploited for the insight they provide into the structural basis of function in heme-based proteins, by revealing the nature of their bonded and nonbonded interactions with the protein. This report presents two novel results which clearly establish a FeCO vibrational signature for crystallographically verified pentacoordination. First, anisotropy in the NRVS density of states for ν(Fe-C) and δ(FeCO) in oriented single crystals of [Fe(OEP)(CO)] clearly reveals that the Fe-C stretch occurs at higher frequency than the FeCO bend and considerably higher than any previously reported heme carbonyl. Second, DFT calculations on a series of heme carbonyls reveal that the frequency crossover occurs near the weak trans O atom donor, furan. As ν(Fe-C) occurs at lower frequencies than δ(FeCO) in all heme protein carbonyls reported to date, the results reported herein suggest that they are all hexacoordinate.

Indexed as

Protein CarbonylationAnisotropyCarbonatesCarbon MonoxideCrystallography, X-RayFerric CompoundsHemeproteinsIronLigandsStereoisomerismCarbonatesCarbon MonoxideFerric CompoundsHemeproteinsIronLigandssiderite

Identifiers

PMID24950373
PMCPMC4120987

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.