Evidence map›Paper›PMID 24949970›Full record

ArticleCell2014

The diabetes susceptibility gene Clec16a regulates mitophagy.

Scott A Soleimanpour, Aditi Gupta, Marina Bakay, Alana M Ferrari, David N Groff, João Fadista, Lynn A Spruce, Jake A Kushner, Leif Groop, Steven H Seeholzer and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 130 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
130citing papers in PubMed, 2 pooled it
17.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

130 citing papers in PubMed, 2 syntheses or guidelines pooled it, 215 citations in OpenAlex.

  1. Guideline
  2. Guideline
  3. Review
  4. Mitochondria-associated programmed cell death in pancreatic β cell of T2DM.Apoptosis : an international journal on programmed cell death · 2026
    Review
  5. Review
  6. Review
  7. Review
  8. Sex as a modifier of genetic risk for type 1 diabetes.Diabetes, obesity & metabolism · 2025
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Is DEXI a Multiple Sclerosis Susceptibility Gene?International journal of molecular sciences · 2025
    Review
  15. Defining Mechanistic Links Between the Non-Coding Variant rs17673553 inInternational journal of molecular sciences · 2025
    Article
  16. Review
  17. Review
  18. Article
  19. Review
  20. Review

70 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Scott A SoleimanpourDivision of Endocrinology, Diabetes and Metabolism, Department of Medicine and the Institute for Diabetes, Obesity and Metabolism of the University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA; Division of Metabolism, Endocrinology & Diabetes and Department of Internal Medicine, University of Michigan Medical School, Ann Arbor, MI 48105, USA.
Aditi GuptaDivision of Endocrinology, Diabetes and Metabolism, Department of Medicine and the Institute for Diabetes, Obesity and Metabolism of the University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA.
Marina BakayCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Alana M FerrariDivision of Endocrinology, Diabetes and Metabolism, Department of Medicine and the Institute for Diabetes, Obesity and Metabolism of the University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA.
David N GroffDivision of Endocrinology, Diabetes and Metabolism, Department of Medicine and the Institute for Diabetes, Obesity and Metabolism of the University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA.
João FadistaLund University Diabetes Center, Department of Clinical Sciences, Diabetes & Endocrinology, Skåne University Hospital, Lund University, SE-205 02 Malmö, Sweden.
Lynn A SpruceChildren's Hospital of Philadelphia Research Institute, Philadelphia, PA 19104, USA.
Jake A KushnerMcNair Medical Institute, Pediatric Diabetes and Endocrinology, Baylor College of Medicine, Houston, TX 77030, USA.
Leif GroopLund University Diabetes Center, Department of Clinical Sciences, Diabetes & Endocrinology, Skåne University Hospital, Lund University, SE-205 02 Malmö, Sweden.
Steven H SeeholzerChildren's Hospital of Philadelphia Research Institute, Philadelphia, PA 19104, USA.
Brett A KaufmanDepartment of Animal Biology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Hakon HakonarsonCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA; Department of Pediatrics, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA.
Doris A StoffersDivision of Endocrinology, Diabetes and Metabolism, Department of Medicine and the Institute for Diabetes, Obesity and Metabolism of the University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA. Electronic address: stoffers@mail.med.upenn.edu.
University of Pennsylvania · USChildren's Hospital of Philadelphia · USLund University · SEBaylor College of Medicine · USUniversity of Michigan · US

Funding

VIRAL VECTOR COREP30DK019525 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI MITCHELL A. LAZAR · 1986 to 2026
$48.3M
ZINC FINGER PROTEINS IN EARLY KIDNEY DEVELOPMENTP01DK049210 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI AHIMA, REXFORD S. · 1995 to 2016
$26.9M
Regional Pilot And Feasibility Study Grants ProgramP30DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Mehboob A Hussain · 2013 to 2026
$24.3M
Fine Mapping and Functional Evaluation of Selected Type 1 Diabetes LociDP3DK085708 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI HAKONARSON, HAKON, POLYCHRONAKOS, CONSTANTIN · 2009 to 2009
$4.8M
The Role of Clec16a in the Pancreatic IsletK08DK089117 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI SOLEIMANPOUR, SCOTT · 2012 to 2016
$776k
NIDDK NIH HHS 1DP3DK085708-01NIDDK NIH HHS 5-P01-DK049210-15NIDDK NIH HHS DP3 DK085708NIDDK NIH HHS K08 DK089117NIDDK NIH HHS K08-DK089117NIDDK NIH HHS P01 DK049210NIDDK NIH HHS P30 DK019525NIDDK NIH HHS P30 DK020572NIDDK NIH HHS P30DK19525
6 · The paper itself

Abstract

Clec16a has been identified as a disease susceptibility gene for type 1 diabetes, multiple sclerosis, and adrenal dysfunction, but its function is unknown. Here we report that Clec16a is a membrane-associated endosomal protein that interacts with E3 ubiquitin ligase Nrdp1. Loss of Clec16a leads to an increase in the Nrdp1 target Parkin, a master regulator of mitophagy. Islets from mice with pancreas-specific deletion of Clec16a have abnormal mitochondria with reduced oxygen consumption and ATP concentration, both of which are required for normal β cell function. Indeed, pancreatic Clec16a is required for normal glucose-stimulated insulin release. Moreover, patients harboring a diabetogenic SNP in the Clec16a gene have reduced islet Clec16a expression and reduced insulin secretion. Thus, Clec16a controls β cell function and prevents diabetes by controlling mitophagy. This pathway could be targeted for prevention and control of diabetes and may extend to the pathogenesis of other Clec16a- and Parkin-associated diseases.

Indexed as

MitophagyAmino Acid SequenceAnimalsCarrier ProteinsDiabetes Mellitus, Type 1Genetic Predisposition to DiseaseGlucoseHumansInsulin-Secreting CellsIslets of LangerhansLectins, C-TypeLysosomesMembrane ProteinsMiceMolecular Sequence DataMonosaccharide Transport ProteinsCarrier ProteinsCLEC16A protein, humanCLEC16A protein, mouseGlucoseLectins, C-TypeMembrane ProteinsMonosaccharide Transport ProteinsRnf41 protein, mouseUbiquitin-Protein Ligases

Identifiers

PMID24949970
PMCPMC4184276
OpenAlexW2067097574

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.