Evidence map›Paper›PMID 24948947›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2014

Optimization of zofimarin production by an endophytic fungus, Xylaria sp. Acra L38.

Jirapan Chaichanan, Suthep Wiyakrutta, Thunyarat Pongtharangkul, Duangnate Isarangkul, Vithaya Meevootisom

Abstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Three New Derivatives of Zopfinol fromJournal of fungi (Basel, Switzerland) · 2021
    Article
  7. Exploring the Antibacterial Activity ofJournal of fungi (Basel, Switzerland) · 2020
    Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jirapan ChaichananDepartment of Microbiology Faculty of Science Mahidol University RachathewiBangkok Thailand.
Suthep WiyakruttaDepartment of Microbiology Faculty of Science Mahidol University RachathewiBangkok Thailand.
Thunyarat PongtharangkulDepartment of Biotechnology Faculty of Science Mahidol University RachathewiBangkok Thailand.
Duangnate IsarangkulDepartment of Microbiology Faculty of Science Mahidol University RachathewiBangkok Thailand.
Vithaya MeevootisomDepartment of Microbiology Faculty of Science Mahidol University RachathewiBangkok Thailand.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To optimize the medium for high zofimarin production, sucrose maltose, glucose, tryptone and peptone were used in an orthogonal array design experiment, where the highest value of zofimarin produced was 25.6 μg/mL. This value was about 3 times higher than that obtained with Czapek yeast extract (CzYE) culture medium. A study with Plackett-Burman design showed that sucrose, maltose, glucose and NaNO3 were significant factors in zofimarin production. Further studies using central composite design (CCD) showed the significance of glucose and the interactions of these critical components affecting zofimarin production. Multiple regression analysis of the data yielded a poor fit as shown by the mismatch of the model with these variable factors. When a polynomial equation was applied, the maximum zofimarin production was predicted to be 201.9 μg/mL. Experimental verification yielded a much lower amount of zofimarin, at around 70 μg/mL. Reconsideration of the CCD data and repetition of some runs with high zofimarin production resulted in reproducible zofimarin yield at 79.7 μg/mL. Even though the amount was lower than the predicted value, the medium optimization study was considered to be quite successful as the yield increased to around 8 times that obtained with the original CzYE culture medium.

Indexed as

Antifungal AgentsCulture MediaEndophytesIndenesXylarialesAntifungal AgentsCulture MediaIndenessordarinendophytic fungusmedium optimizationsecondary metabolitestatistical methodszofimarin

Identifiers

PMID24948947
PMCPMC4059313

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.