Evidence map›Paper›PMID 24948754›Full record

ArticleGenome announcements2014

Genome Sequences of Nine Bordetella holmesii Strains Isolated in the United States.

Eric T Harvill, Laura L Goodfield, Yury Ivanov, William E Smallridge, Jessica A Meyer, Pamela K Cassiday, Maria L Tondella, Lauren Brinkac, Ravi Sanka, Maria Kim and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Genome announcements, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.6field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. International journal of molecular sciences · 2020
    Article
  3. Review
  4. Open forum infectious diseases · 2019
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Eric T HarvillThe Pennsylvania State University, University Park, Pennsylvania, USA.
Laura L GoodfieldThe Pennsylvania State University, University Park, Pennsylvania, USA.
Yury IvanovThe Pennsylvania State University, University Park, Pennsylvania, USA.
William E SmallridgeThe Pennsylvania State University, University Park, Pennsylvania, USA.
Jessica A MeyerThe Pennsylvania State University, University Park, Pennsylvania, USA.
Pamela K CassidayCenters for Disease Control and Prevention, Atlanta, Georgia, USA.
Maria L TondellaCenters for Disease Control and Prevention, Atlanta, Georgia, USA.
Lauren BrinkacJ. Craig Venter Institute, Rockville, Maryland, USA.
Ravi SankaJ. Craig Venter Institute, Rockville, Maryland, USA.
Maria KimJ. Craig Venter Institute, Rockville, Maryland, USA.
Liliana LosadaJ. Craig Venter Institute, Rockville, Maryland, USA llosada@jcvi.org.
Pennsylvania State University · USJ. Craig Venter Institute · USCenters for Disease Control and Prevention · US

Funding

Evolution of the Bordetellae from Commensals to PathogensR01GM083113 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI HARVILL, ERIC T · 2008 to 2011
$2.1M
The Microbiota Pathogen CompetitionR01GM113681 · NIGMS · UNIVERSITY OF GEORGIA · PI HARVILL, ERIC T · 2015 to 2018
$1.3M
NIAID NIH HHS HHSN272200900007CNIGMS NIH HHS R01 GM083113NIGMS NIH HHS R01 GM113681
6 · The paper itself

Abstract

An increasing number of pertussis-like cases are attributed to the emergent pathogen Bordetella holmesii. The genomes of 9 clinical isolates show that they are clonal, lack the virulence factors encoded by B. pertussis, and are more similar to nonpertussis bordetellae. New markers for B. holmesii can be developed using these sequences.

Identifiers

PMID24948754
PMCPMC4064020
OpenAlexW2053450064

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.